Table S2. SAGE tag levels for nonretinal, P10.5, adult retina, and ONL libraries
This lists a full breakdown of all SAGE tags from the following libraries: 3T3 cells, hypothalamus, P10.5 crx-/-, P10.5 crx+/+, adult whole retina and adult microdissected outer nuclear layer (ONL).  Tag totals are normalized to 55,000.  The Gene field contains the mouse Unigene number assignment for the tag followed by the gene name.  Tags with multiple predicted identities are listed together in the Gene column.
Tag Gene 3t3 hypothalamus P10.5 crx-/- P10.5 crx+/+ adult retina ONL
TACCAGCGTA 7861 heterogeneous nuclear ribonucleoprotein D-like 0.0 0.0 0.0 0.0 1.0 1.1
GGGCCCCCTT 8 upstream transcription factor 1 0.0 0.0 0.0 0.0 1.0 1.1
TAGGCCACAG 8010 hyperpolarization-activated, cyclic nucleotide-gated K+ 1 0.0 0.0 0.0 0.0 1.0 1.1
TCCAAGCACA 83544 ESTs 0.0 0.0 0.0 0.0 1.0 1.1
ACCCTGGGTT 83643 ESTs 0.0 0.0 0.0 0.0 1.0 1.1
CTTAATAAAG 86519 ESTs 0.0 0.0 0.0 0.0 1.0 1.1
TACCAGGAAC 86792 RIKEN cDNA 1700007I08 gene 0.0 0.0 0.0 0.0 1.0 1.1
GCTGCAGCTG 87210 ESTs 0.0 0.0 0.0 0.0 1.0 1.1
GGACACAATG 87661 ESTs 0.0 0.0 0.0 0.0 1.0 1.1
TTGTTTATAT 89683 ESTs 0.0 0.0 0.0 0.0 1.0 1.1
TAGATGCTAA 89926 DinB homolog 1 (E. coli) 0.0 0.0 0.0 0.0 1.0 1.1
GAACACAGAC 95719 EST 0.0 0.0 0.0 0.0 1.0 1.1
AAAGTAGAAA 96073 ESTs 0.0 0.0 0.0 0.0 1.0 1.1
GAAACAGTTC 990 protein kinase C, mu 0.0 0.0 0.0 0.0 1.0 1.1
AAAAAACTTA 0.0 0.0 0.0 0.0 1.0 1.1
AAAATAATCC 0.0 0.0 0.0 0.0 1.0 1.1
AAACAAGCTG 0.0 0.0 0.0 0.0 1.0 1.1
AAACCAAAAT 0.0 0.0 0.0 0.0 1.0 1.1
AAAGCTGGGT 0.0 0.0 0.0 0.0 1.0 1.1
AAAGGATTCT 0.0 0.0 0.0 0.0 1.0 1.1
AAAGGCTTTT 0.0 0.0 0.0 0.0 1.0 1.1
AAATTCGTAG 0.0 0.0 0.0 0.0 1.0 1.1
AAATTTCATC 0.0 0.0 0.0 0.0 1.0 1.1
AACAAAGGAT 0.0 0.0 0.0 0.0 1.0 1.1
AACACGGTGG 0.0 0.0 0.0 0.0 1.0 1.1
AACGCGTGTG 0.0 0.0 0.0 0.0 1.0 1.1
AACTCTTTCT 0.0 0.0 0.0 0.0 1.0 1.1
AAGAACTCCG 0.0 0.0 0.0 0.0 1.0 1.1
AAGACTGATA 0.0 0.0 0.0 0.0 1.0 1.1
AAGAGCGTCC 0.0 0.0 0.0 0.0 1.0 1.1
AAGAGGCAAA 0.0 0.0 0.0 0.0 1.0 1.1
AAGCTGGTGG 0.0 0.0 0.0 0.0 1.0 1.1
AAGGACTTGA 0.0 0.0 0.0 0.0 1.0 1.1
AAGGCAAAAC 0.0 0.0 0.0 0.0 1.0 1.1
AAGGCCCACC 0.0 0.0 0.0 0.0 1.0 1.1
AAGGGGGCTG 0.0 0.0 0.0 0.0 1.0 1.1
AAGGTTTGTA 0.0 0.0 0.0 0.0 1.0 1.1
AATAAAAATA 0.0 0.0 0.0 0.0 1.0 1.1
AATCGCGATA 0.0 0.0 0.0 0.0 1.0 1.1
AATGGGGGGG 0.0 0.0 0.0 0.0 1.0 1.1
AATTGTCAAA 0.0 0.0 0.0 0.0 1.0 1.1
ACAAGCGTCC 0.0 0.0 0.0 0.0 1.0 1.1
ACACCCTGCG 0.0 0.0 0.0 0.0 1.0 1.1
ACACTTGGAT 0.0 0.0 0.0 0.0 1.0 1.1
ACAGAGATGG 0.0 0.0 0.0 0.0 1.0 1.1
ACAGCGGCAG 0.0 0.0 0.0 0.0 1.0 1.1
ACAGGTAAAA 0.0 0.0 0.0 0.0 1.0 1.1
ACATTATTCA 0.0 0.0 0.0 0.0 1.0 1.1
ACCACAAAAA 0.0 0.0 0.0 0.0 1.0 1.1
ACCCCCGCAT 0.0 0.0 0.0 0.0 1.0 1.1
ACCTCCCTAA 0.0 0.0 0.0 0.0 1.0 1.1
ACCTGTCACT 0.0 0.0 0.0 0.0 1.0 1.1
ACGCTCAAAA 0.0 0.0 0.0 0.0 1.0 1.1
ACGCTTCACA 0.0 0.0 0.0 0.0 1.0 1.1
ACTAAGCAAG 0.0 0.0 0.0 0.0 1.0 1.1
ACTCCAGCCG 0.0 0.0 0.0 0.0 1.0 1.1
ACTCTTCTGG 0.0 0.0 0.0 0.0 1.0 1.1
ACTGGTGCAG 0.0 0.0 0.0 0.0 1.0 1.1
ACTTGGGAGA 0.0 0.0 0.0 0.0 1.0 1.1
AGACGGAGAT 0.0 0.0 0.0 0.0 1.0 1.1
AGATTTCGGG 0.0 0.0 0.0 0.0 1.0 1.1
AGCAATTCAG 0.0 0.0 0.0 0.0 1.0 1.1
AGCACTGGAA 0.0 0.0 0.0 0.0 1.0 1.1
AGCCAAGTAC 0.0 0.0 0.0 0.0 1.0 1.1
AGCCGGGAGG 0.0 0.0 0.0 0.0 1.0 1.1
AGCGGCCCCA 0.0 0.0 0.0 0.0 1.0 1.1
AGGAGTGCGG 0.0 0.0 0.0 0.0 1.0 1.1
AGGGATGAGG 0.0 0.0 0.0 0.0 1.0 1.1
AGGTCCTGAG 0.0 0.0 0.0 0.0 1.0 1.1
AGTTCTTGGG 0.0 0.0 0.0 0.0 1.0 1.1
AGTTGATGAT 0.0 0.0 0.0 0.0 1.0 1.1
ATAATGACCC 0.0 0.0 0.0 0.0 1.0 1.1
ATACGTGACA 0.0 0.0 0.0 0.0 1.0 1.1
ATAGATGCTG 0.0 0.0 0.0 0.0 1.0 1.1
ATCACCCTTC 0.0 0.0 0.0 0.0 1.0 1.1
ATCCCTGGTA 0.0 0.0 0.0 0.0 1.0 1.1
ATCCTCTGCC 0.0 0.0 0.0 0.0 1.0 1.1
ATCTGAAATC 0.0 0.0 0.0 0.0 1.0 1.1
ATCTGTCACA 0.0 0.0 0.0 0.0 1.0 1.1
ATCTTTTACA 0.0 0.0 0.0 0.0 1.0 1.1
ATGGCTGGAA 0.0 0.0 0.0 0.0 1.0 1.1
ATGGCTGTAC 0.0 0.0 0.0 0.0 1.0 1.1
ATGGCTTGGA 0.0 0.0 0.0 0.0 1.0 1.1
ATGGCTTTGA 0.0 0.0 0.0 0.0 1.0 1.1
ATGGTGCACG 0.0 0.0 0.0 0.0 1.0 1.1
ATGTTGCCTA 0.0 0.0 0.0 0.0 1.0 1.1
ATTCGCTGTG 0.0 0.0 0.0 0.0 1.0 1.1
ATTTAAGTGA 0.0 0.0 0.0 0.0 1.0 1.1
ATTTACTCAG 0.0 0.0 0.0 0.0 1.0 1.1
CAAACTCCTC 0.0 0.0 0.0 0.0 1.0 1.1
CAAAGATCCC 0.0 0.0 0.0 0.0 1.0 1.1
CAAAGTAAAT 0.0 0.0 0.0 0.0 1.0 1.1
CAAATGGACC 0.0 0.0 0.0 0.0 1.0 1.1
CAACGCTCCC 0.0 0.0 0.0 0.0 1.0 1.1
CAACTTAAGA 0.0 0.0 0.0 0.0 1.0 1.1
CAAGAGCATC 0.0 0.0 0.0 0.0 1.0 1.1
CAAGATGGTG 0.0 0.0 0.0 0.0 1.0 1.1
CAAGGAATTT 0.0 0.0 0.0 0.0 1.0 1.1
CAATAAGCGA 0.0 0.0 0.0 0.0 1.0 1.1
CACAATAGTG 0.0 0.0 0.0 0.0 1.0 1.1
CACACATTAG 0.0 0.0 0.0 0.0 1.0 1.1
CACAGGTCCA 0.0 0.0 0.0 0.0 1.0 1.1
CACAGTATGT 0.0 0.0 0.0 0.0 1.0 1.1
CACCTAACTG 0.0 0.0 0.0 0.0 1.0 1.1
CACGCGCGTG 0.0 0.0 0.0 0.0 1.0 1.1
CACGTCGGCT 0.0 0.0 0.0 0.0 1.0 1.1
CACTACAACA 0.0 0.0 0.0 0.0 1.0 1.1
CACTTCTTGG 0.0 0.0 0.0 0.0 1.0 1.1
CAGAATGTGT 0.0 0.0 0.0 0.0 1.0 1.1
CAGAGCCAGG 0.0 0.0 0.0 0.0 1.0 1.1
CAGATGATAT 0.0 0.0 0.0 0.0 1.0 1.1
CAGCCAACCC 0.0 0.0 0.0 0.0 1.0 1.1
CAGGAAATTT 0.0 0.0 0.0 0.0 1.0 1.1
CAGGCAGGGC 0.0 0.0 0.0 0.0 1.0 1.1
CAGGCTCACA 0.0 0.0 0.0 0.0 1.0 1.1
CAGGGGTTGG 0.0 0.0 0.0 0.0 1.0 1.1
CAGTAATGTG 0.0 0.0 0.0 0.0 1.0 1.1
CAGTGATTCT 0.0 0.0 0.0 0.0 1.0 1.1
CAGTGGTGCA 0.0 0.0 0.0 0.0 1.0 1.1
CAGTTAAAAA 0.0 0.0 0.0 0.0 1.0 1.1
CATAGTAAAG 0.0 0.0 0.0 0.0 1.0 1.1
CATCCTACCA 0.0 0.0 0.0 0.0 1.0 1.1
CCAAGTTTGA 0.0 0.0 0.0 0.0 1.0 1.1
CCACTAGAAA 0.0 0.0 0.0 0.0 1.0 1.1
CCAGGTCGGG 0.0 0.0 0.0 0.0 1.0 1.1
CCATTGATGG 0.0 0.0 0.0 0.0 1.0 1.1
CCCATTGGGG 0.0 0.0 0.0 0.0 1.0 1.1
CCCTGTCCAA 0.0 0.0 0.0 0.0 1.0 1.1
CCGTCTGTGG 0.0 0.0 0.0 0.0 1.0 1.1
CCGTGTGGTA 0.0 0.0 0.0 0.0 1.0 1.1
CCTCCAAACT 0.0 0.0 0.0 0.0 1.0 1.1
CCTGATAACT 0.0 0.0 0.0 0.0 1.0 1.1
CCTGGAGTCT 0.0 0.0 0.0 0.0 1.0 1.1
CCTTTAGCTG 0.0 0.0 0.0 0.0 1.0 1.1
CCTTTGCTCA 0.0 0.0 0.0 0.0 1.0 1.1
CCTTTGTTCG 0.0 0.0 0.0 0.0 1.0 1.1
CCTTTTGTGA 0.0 0.0 0.0 0.0 1.0 1.1
CGAAAGAAGG 0.0 0.0 0.0 0.0 1.0 1.1
CGGGTCCCCA 0.0 0.0 0.0 0.0 1.0 1.1
CTACACTGAG 0.0 0.0 0.0 0.0 1.0 1.1
CTACCAATTT 0.0 0.0 0.0 0.0 1.0 1.1
CTAGCTTAAT 0.0 0.0 0.0 0.0 1.0 1.1
CTAGTCCTTG 0.0 0.0 0.0 0.0 1.0 1.1
CTAGTTACCT 0.0 0.0 0.0 0.0 1.0 1.1
CTATATCCCT 0.0 0.0 0.0 0.0 1.0 1.1
CTCCAATGAG 0.0 0.0 0.0 0.0 1.0 1.1
CTCCAATGCT 0.0 0.0 0.0 0.0 1.0 1.1
CTCGGGTGCC 0.0 0.0 0.0 0.0 1.0 1.1
CTCTTGGCAT 0.0 0.0 0.0 0.0 1.0 1.1
CTCTTTGCCA 0.0 0.0 0.0 0.0 1.0 1.1
CTCTTTGGGC 0.0 0.0 0.0 0.0 1.0 1.1
CTCTTTGTAG 0.0 0.0 0.0 0.0 1.0 1.1
CTGGTAAGGC 0.0 0.0 0.0 0.0 1.0 1.1
CTGGTTGATA 0.0 0.0 0.0 0.0 1.0 1.1
CTGTGAAACA 0.0 0.0 0.0 0.0 1.0 1.1
CTGTGCCTGC 0.0 0.0 0.0 0.0 1.0 1.1
CTTAAGTAAC 0.0 0.0 0.0 0.0 1.0 1.1
CTTCCCTCAT 0.0 0.0 0.0 0.0 1.0 1.1
CTTGCAAGCC 0.0 0.0 0.0 0.0 1.0 1.1
CTTGTATGGG 0.0 0.0 0.0 0.0 1.0 1.1
CTTTGAGTAA 0.0 0.0 0.0 0.0 1.0 1.1
CTTTGTGACA 0.0 0.0 0.0 0.0 1.0 1.1
CTTTTCTGGT 0.0 0.0 0.0 0.0 1.0 1.1
GAAAAATGAA 0.0 0.0 0.0 0.0 1.0 1.1
GAAGGCATCT 0.0 0.0 0.0 0.0 1.0 1.1
GAAGGGGAAG 0.0 0.0 0.0 0.0 1.0 1.1
GACAAGTATT 0.0 0.0 0.0 0.0 1.0 1.1
GACCAAGGCT 0.0 0.0 0.0 0.0 1.0 1.1
GACGCACCAC 0.0 0.0 0.0 0.0 1.0 1.1
GACTGATGTG 0.0 0.0 0.0 0.0 1.0 1.1
GAGAAAGGAC 0.0 0.0 0.0 0.0 1.0 1.1
GAGAAGCAGG 0.0 0.0 0.0 0.0 1.0 1.1
GAGAGCTGGG 0.0 0.0 0.0 0.0 1.0 1.1
GAGATACAGA 0.0 0.0 0.0 0.0 1.0 1.1
GAGCACGGGC 0.0 0.0 0.0 0.0 1.0 1.1
GAGCGCCACA 0.0 0.0 0.0 0.0 1.0 1.1
GAGCTTACTG 0.0 0.0 0.0 0.0 1.0 1.1
GAGGAAAAAA 0.0 0.0 0.0 0.0 1.0 1.1
GAGGCAGGAC 0.0 0.0 0.0 0.0 1.0 1.1
GAGGCATTCT 0.0 0.0 0.0 0.0 1.0 1.1
GAGGTGCATA 0.0 0.0 0.0 0.0 1.0 1.1
GAGGTGGCAG 0.0 0.0 0.0 0.0 1.0 1.1
GAGTAGCTTT 0.0 0.0 0.0 0.0 1.0 1.1
GAGTTTGACT 0.0 0.0 0.0 0.0 1.0 1.1
GATACAGAGT 0.0 0.0 0.0 0.0 1.0 1.1
GATACAGCCT 0.0 0.0 0.0 0.0 1.0 1.1
GATCCAGCTC 0.0 0.0 0.0 0.0 1.0 1.1
GATCCTCAGA 0.0 0.0 0.0 0.0 1.0 1.1
GATCTTGCCA 0.0 0.0 0.0 0.0 1.0 1.1
GATCTTGTTA 0.0 0.0 0.0 0.0 1.0 1.1
GATGACTGTC 0.0 0.0 0.0 0.0 1.0 1.1
GATGTGTAGG 0.0 0.0 0.0 0.0 1.0 1.1
GCAAAACAAG 0.0 0.0 0.0 0.0 1.0 1.1
GCAACGTATA 0.0 0.0 0.0 0.0 1.0 1.1
GCAACTTAGG 0.0 0.0 0.0 0.0 1.0 1.1
GCAAGAGATA 0.0 0.0 0.0 0.0 1.0 1.1
GCAAGGCAAA 0.0 0.0 0.0 0.0 1.0 1.1
GCACCAAACT 0.0 0.0 0.0 0.0 1.0 1.1
GCACGCACAC 0.0 0.0 0.0 0.0 1.0 1.1
GCAGAGGTCC 0.0 0.0 0.0 0.0 1.0 1.1
GCCAGTTCCA 0.0 0.0 0.0 0.0 1.0 1.1
GCCCCCATTT 0.0 0.0 0.0 0.0 1.0 1.1
GCCGCCCTCT 0.0 0.0 0.0 0.0 1.0 1.1
GCCGGGTGTG 0.0 0.0 0.0 0.0 1.0 1.1
GCCTCAGGGA 0.0 0.0 0.0 0.0 1.0 1.1
GCGGCCCTCC 0.0 0.0 0.0 0.0 1.0 1.1
GCGTAATGTA 0.0 0.0 0.0 0.0 1.0 1.1
GCTCACAGGC 0.0 0.0 0.0 0.0 1.0 1.1
GCTCCAGATA 0.0 0.0 0.0 0.0 1.0 1.1
GCTCCTCATT 0.0 0.0 0.0 0.0 1.0 1.1
GCTCTGTGGC 0.0 0.0 0.0 0.0 1.0 1.1
GCTGCATATA 0.0 0.0 0.0 0.0 1.0 1.1
GCTGCGATCT 0.0 0.0 0.0 0.0 1.0 1.1
GCTGCTGGCC 0.0 0.0 0.0 0.0 1.0 1.1
GCTGGTCTGC 0.0 0.0 0.0 0.0 1.0 1.1
GCTGTCCGCT 0.0 0.0 0.0 0.0 1.0 1.1
GCTGTGACTG 0.0 0.0 0.0 0.0 1.0 1.1
GCTTCTCTAA 0.0 0.0 0.0 0.0 1.0 1.1
GGAAAAATAT 0.0 0.0 0.0 0.0 1.0 1.1
GGAATGGGCT 0.0 0.0 0.0 0.0 1.0 1.1
GGACCAAATA 0.0 0.0 0.0 0.0 1.0 1.1
GGACTCCAAG 0.0 0.0 0.0 0.0 1.0 1.1
GGAGACCAGC 0.0 0.0 0.0 0.0 1.0 1.1
GGATTATAAG 0.0 0.0 0.0 0.0 1.0 1.1
GGCAATCTCT 0.0 0.0 0.0 0.0 1.0 1.1
GGCAGACTTG 0.0 0.0 0.0 0.0 1.0 1.1
GGCCCAAAAA 0.0 0.0 0.0 0.0 1.0 1.1
GGCCGTGAGT 0.0 0.0 0.0 0.0 1.0 1.1
GGCGGGCGCA 0.0 0.0 0.0 0.0 1.0 1.1
GGCTTTTACT 0.0 0.0 0.0 0.0 1.0 1.1
GGGAGGACTT 0.0 0.0 0.0 0.0 1.0 1.1
GGGCACCCCC 0.0 0.0 0.0 0.0 1.0 1.1
GGGCACCCCT 0.0 0.0 0.0 0.0 1.0 1.1
GGGGCCTGCT 0.0 0.0 0.0 0.0 1.0 1.1
GGGGCGCACA 0.0 0.0 0.0 0.0 1.0 1.1
GGGGCTTGCC 0.0 0.0 0.0 0.0 1.0 1.1
GGTCATATGG 0.0 0.0 0.0 0.0 1.0 1.1
GGTCCATAGG 0.0 0.0 0.0 0.0 1.0 1.1
GGTCTTACTA 0.0 0.0 0.0 0.0 1.0 1.1
GGTCTTTCGG 0.0 0.0 0.0 0.0 1.0 1.1
GGTGACAGCT 0.0 0.0 0.0 0.0 1.0 1.1
GGTGTTGGAT 0.0 0.0 0.0 0.0 1.0 1.1
GGTTATAAAC 0.0 0.0 0.0 0.0 1.0 1.1
GGTTATATAT 0.0 0.0 0.0 0.0 1.0 1.1
GGTTCTGCTT 0.0 0.0 0.0 0.0 1.0 1.1
GTAGTTCACA 0.0 0.0 0.0 0.0 1.0 1.1
GTATATTTCT 0.0 0.0 0.0 0.0 1.0 1.1
GTCCATTACA 0.0 0.0 0.0 0.0 1.0 1.1
GTCGATAATC 0.0 0.0 0.0 0.0 1.0 1.1
GTCTAGCCTC 0.0 0.0 0.0 0.0 1.0 1.1
GTCTCCTGTT 0.0 0.0 0.0 0.0 1.0 1.1
GTGACGCACA 0.0 0.0 0.0 0.0 1.0 1.1
GTGAGGTTTG 0.0 0.0 0.0 0.0 1.0 1.1
GTGCGGGCGA 0.0 0.0 0.0 0.0 1.0 1.1
GTGGATTCCA 0.0 0.0 0.0 0.0 1.0 1.1
GTGGCACCTA 0.0 0.0 0.0 0.0 1.0 1.1
GTGGCTCTAC 0.0 0.0 0.0 0.0 1.0 1.1
GTGGGAATAC 0.0 0.0 0.0 0.0 1.0 1.1
GTGTCTACTC 0.0 0.0 0.0 0.0 1.0 1.1
GTGTCTCCCT 0.0 0.0 0.0 0.0 1.0 1.1
GTGTGAATGT 0.0 0.0 0.0 0.0 1.0 1.1
GTGTGACAGA 0.0 0.0 0.0 0.0 1.0 1.1
GTGTTGTCTG 0.0 0.0 0.0 0.0 1.0 1.1
GTTATCCACT 0.0 0.0 0.0 0.0 1.0 1.1
GTTCAGAGAA 0.0 0.0 0.0 0.0 1.0 1.1
GTTGCACACG 0.0 0.0 0.0 0.0 1.0 1.1
GTTGTGCACA 0.0 0.0 0.0 0.0 1.0 1.1
TAAAACAATA 0.0 0.0 0.0 0.0 1.0 1.1
TAAAGTGTGC 0.0 0.0 0.0 0.0 1.0 1.1
TAAATGGCCT 0.0 0.0 0.0 0.0 1.0 1.1
TAACTGGTAT 0.0 0.0 0.0 0.0 1.0 1.1
TAAGATTGAA 0.0 0.0 0.0 0.0 1.0 1.1
TAAGCCCTTG 0.0 0.0 0.0 0.0 1.0 1.1
TAAGCTTAAC 0.0 0.0 0.0 0.0 1.0 1.1
TAAGGTAGTT 0.0 0.0 0.0 0.0 1.0 1.1
TAATAAACAT 0.0 0.0 0.0 0.0 1.0 1.1
TAGAGCAATA 0.0 0.0 0.0 0.0 1.0 1.1
TAGCATCAGA 0.0 0.0 0.0 0.0 1.0 1.1
TAGGATGTGT 0.0 0.0 0.0 0.0 1.0 1.1
TATGAGAATA 0.0 0.0 0.0 0.0 1.0 1.1
TATGAGCAAT 0.0 0.0 0.0 0.0 1.0 1.1
TCAAATACAG 0.0 0.0 0.0 0.0 1.0 1.1
TCAAGCAAAA 0.0 0.0 0.0 0.0 1.0 1.1
TCAGTGGGGA 0.0 0.0 0.0 0.0 1.0 1.1
TCCACGGTAC 0.0 0.0 0.0 0.0 1.0 1.1
TCCGCACTGC 0.0 0.0 0.0 0.0 1.0 1.1
TCCGGCTGCC 0.0 0.0 0.0 0.0 1.0 1.1
TCCTCGGTAC 0.0 0.0 0.0 0.0 1.0 1.1
TCTAGCAGTT 0.0 0.0 0.0 0.0 1.0 1.1
TCTCTAGGCC 0.0 0.0 0.0 0.0 1.0 1.1
TCTGCCAAGA 0.0 0.0 0.0 0.0 1.0 1.1
TCTGCTTTGC 0.0 0.0 0.0 0.0 1.0 1.1
TCTTTAGAAA 0.0 0.0 0.0 0.0 1.0 1.1
TGAAAAATCC 0.0 0.0 0.0 0.0 1.0 1.1
TGAAACCTTC 0.0 0.0 0.0 0.0 1.0 1.1
TGAAGCCAGC 0.0 0.0 0.0 0.0 1.0 1.1
TGACACACAT 0.0 0.0 0.0 0.0 1.0 1.1
TGACTTGCTC 0.0 0.0 0.0 0.0 1.0 1.1
TGAGTCCTGG 0.0 0.0 0.0 0.0 1.0 1.1
TGATCCTGGC 0.0 0.0 0.0 0.0 1.0 1.1
TGCAAATAGA 0.0 0.0 0.0 0.0 1.0 1.1
TGCAGGCTTA 0.0 0.0 0.0 0.0 1.0 1.1
TGCATCTAAC 0.0 0.0 0.0 0.0 1.0 1.1
TGCATCTGAA 0.0 0.0 0.0 0.0 1.0 1.1
TGCTCCTAAA 0.0 0.0 0.0 0.0 1.0 1.1
TGCTGACAGT 0.0 0.0 0.0 0.0 1.0 1.1
TGGAGAGAAC 0.0 0.0 0.0 0.0 1.0 1.1
TGGAGGCAGT 0.0 0.0 0.0 0.0 1.0 1.1
TGGAGTCTGT 0.0 0.0 0.0 0.0 1.0 1.1
TGGCACTTGA 0.0 0.0 0.0 0.0 1.0 1.1
TGGGCCACAG 0.0 0.0 0.0 0.0 1.0 1.1
TGGTAATCAA 0.0 0.0 0.0 0.0 1.0 1.1
TGGTGGCAAC 0.0 0.0 0.0 0.0 1.0 1.1
TGTAAGGCCT 0.0 0.0 0.0 0.0 1.0 1.1
TGTAGCAGGA 0.0 0.0 0.0 0.0 1.0 1.1
TGTATTGTCT 0.0 0.0 0.0 0.0 1.0 1.1
TGTCCACAAC 0.0 0.0 0.0 0.0 1.0 1.1
TGTGACCGGT 0.0 0.0 0.0 0.0 1.0 1.1
TGTGCAAGGG 0.0 0.0 0.0 0.0 1.0 1.1
TGTGCAATCC 0.0 0.0 0.0 0.0 1.0 1.1
TGTGCAGTGC 0.0 0.0 0.0 0.0 1.0 1.1
TGTGCTAATT 0.0 0.0 0.0 0.0 1.0 1.1
TGTGGTGGCT 0.0 0.0 0.0 0.0 1.0 1.1
TGTGTCTAAC 0.0 0.0 0.0 0.0 1.0 1.1
TGTGTGTGTT 0.0 0.0 0.0 0.0 1.0 1.1
TGTGTGTTGG 0.0 0.0 0.0 0.0 1.0 1.1
TGTTCCACCA 0.0 0.0 0.0 0.0 1.0 1.1
TGTTCCTTCA 0.0 0.0 0.0 0.0 1.0 1.1
TGTTGTGGGG 0.0 0.0 0.0 0.0 1.0 1.1
TTACTGCCTT 0.0 0.0 0.0 0.0 1.0 1.1
TTACTTTATC 0.0 0.0 0.0 0.0 1.0 1.1
TTAGGGGCTG 0.0 0.0 0.0 0.0 1.0 1.1
TTAGGTGAGG 0.0 0.0 0.0 0.0 1.0 1.1
TTATACAAAT 0.0 0.0 0.0 0.0 1.0 1.1
TTCAATAGTT 0.0 0.0 0.0 0.0 1.0 1.1
TTCACCCCAC 0.0 0.0 0.0 0.0 1.0 1.1
TTCTGTGAGC 0.0 0.0 0.0 0.0 1.0 1.1
TTCTTGGGGG 0.0 0.0 0.0 0.0 1.0 1.1
TTGAAGCCAT 0.0 0.0 0.0 0.0 1.0 1.1
TTGAGAGCCA 0.0 0.0 0.0 0.0 1.0 1.1
TTGATCAGTG 0.0 0.0 0.0 0.0 1.0 1.1
TTGGTAAGTG 0.0 0.0 0.0 0.0 1.0 1.1
TTTGGCTCCA 0.0 0.0 0.0 0.0 1.0 1.1
TTTGTATAGC 0.0 0.0 0.0 0.0 1.0 1.1
TTTGTATCAA 0.0 0.0 0.0 0.0 1.0 1.1
TAATCATTGG 0.0 0.0 0.0 0.0 0.0 22.1
TATAGTCTTT 0.0 0.0 0.0 0.0 0.0 21.1
GGGAAGCCCC 104972 RIKEN cDNA 6720456I16 gene 147697 RIKEN cDNA 9430095H01 gene 29890 RIKEN cDNA 2700043D08 gene 0.0 0.0 0.0 0.0 0.0 19.0
TAAGGAGAAG 0.0 0.0 0.0 0.0 0.0 19.0
TGCACAGTCC 0.0 0.0 0.0 0.0 0.0 19.0
ATCAAGTAGG 0.0 0.0 0.0 0.0 0.0 17.9
ATGCTGGAGG 87620 ESTs 0.0 0.0 0.0 0.0 0.0 14.7
AAATTCATAG 0.0 0.0 0.0 0.0 0.0 14.7
AGGAAAGCTG 0.0 0.0 0.0 0.0 0.0 14.7
GAGGTCCCCA 68170 ESTs 0.0 0.0 0.0 0.0 0.0 13.7
GAATATCTTG 0.0 0.0 0.0 0.0 0.0 13.7
TATGTTTAAA 2185 budding uninhibited by benzimidazoles 1 homolog (S. cerevisiae) 22986 glycolipid transfer protein 0.0 0.0 0.0 0.0 0.0 12.6
ACTTGAACTA 101865 ESTs 0.0 0.0 0.0 0.0 0.0 10.5
ACATTAACAG 0.0 0.0 0.0 0.0 0.0 10.5
ATCCACAGGG 0.0 0.0 0.0 0.0 0.0 10.5
CTTCCATTCA 0.0 0.0 0.0 0.0 0.0 10.5
GAAGTTGAAC 0.0 0.0 0.0 0.0 0.0 10.5
GATACAGATA 0.0 0.0 0.0 0.0 0.0 10.5
GTACAGCCAT 156919 cathepsin Z 0.0 0.0 0.0 0.0 0.0 9.5
GTTCGTGCCA 19355 RIKEN cDNA 2810431L15 gene 0.0 0.0 0.0 0.0 0.0 9.5
GCACACAACA 28581 ESTs 4097 retinoid X receptor interacting protein 110 0.0 0.0 0.0 0.0 0.0 9.5
GGGATATCAA 0.0 0.0 0.0 0.0 0.0 9.5
TGACAGTCAA 0.0 0.0 0.0 0.0 0.0 9.5
TGTGCTAAAT 140568 RIKEN cDNA 1100001I22 gene 0.0 0.0 0.0 0.0 0.0 8.4
CCTCGCAAGA 0.0 0.0 0.0 0.0 0.0 8.4
GACGTCAAGT 0.0 0.0 0.0 0.0 0.0 8.4
GCGACCGTCA 0.0 0.0 0.0 0.0 0.0 8.4
GCTAGCCACT 0.0 0.0 0.0 0.0 0.0 8.4
GGTTTTTGTT 130687 ESTs, Weakly similar to zinc finger protein 2 [R.norvegicus] 151456 EST 17898 cold inducible RNA-binding protein 34374 RIKEN cDNA 2200008D09 gene 61315 EST 0.0 0.0 0.0 0.0 0.0 7.4
CGTTAAATAA 0.0 0.0 0.0 0.0 0.0 7.4
GTTTTATCCT 0.0 0.0 0.0 0.0 0.0 7.4
TCTGGATCGG 0.0 0.0 0.0 0.0 0.0 7.4
TTAAAGGATT 0.0 0.0 0.0 0.0 0.0 7.4
AAATTCTTAG 11779 ESTs 182612 ESTs 0.0 0.0 0.0 0.0 0.0 6.3
CCGCAGCCAG 4696 ribosomal protein S3 0.0 0.0 0.0 0.0 0.0 6.3
AAACTGAAAA 0.0 0.0 0.0 0.0 0.0 6.3
ATGGATATGT 0.0 0.0 0.0 0.0 0.0 6.3
CCAGAACAAA 0.0 0.0 0.0 0.0 0.0 6.3
CGTGCTATCG 0.0 0.0 0.0 0.0 0.0 6.3
GACTGACCCA 0.0 0.0 0.0 0.0 0.0 6.3
TTCATTCCAA 0.0 0.0 0.0 0.0 0.0 6.3
TTTAATGTTT 10331 tumor necrosis factor, alpha-induced protein 1 (endothelial) 0.0 0.0 0.0 0.0 0.0 5.3
CCTGTAATTC 150194 ESTs 158991 RIKEN cDNA 1700018P08 gene 173993 ESTs 23562 ESTs 25732 RIKEN cDNA 1200014H24 gene 0.0 0.0 0.0 0.0 0.0 5.3
AAGGTGAAGG 167730 ESTs 27797 ESTs, Highly similar to The ha3523 gene product is related to S.cerevisiae gene product located in chromosome III [H.sapiens] 3935 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 13 (RNA helicase A) 0.0 0.0 0.0 0.0 0.0 5.3
TGGTCTGTGG 176044 EST 18496 RIKEN cDNA 2610101N11 gene 0.0 0.0 0.0 0.0 0.0 5.3
TCCCATTGGG 24781 ESTs, Weakly similar to immune associated protein 38 [M.musculus] 0.0 0.0 0.0 0.0 0.0 5.3
GGAAACTGAG 34606 RIKEN cDNA 2610511F02 gene 3760 fatty acid synthase 8569 RIKEN cDNA 2310037P21 gene 0.0 0.0 0.0 0.0 0.0 5.3
GTGGGCGTCT 643 ribosomal protein S15 0.0 0.0 0.0 0.0 0.0 5.3
TACAGTTCAA 7051 radixin 0.0 0.0 0.0 0.0 0.0 5.3
AAGAACTCCC 0.0 0.0 0.0 0.0 0.0 5.3
ACCTGCGAAG 0.0 0.0 0.0 0.0 0.0 5.3
ATACTTAGAT 0.0 0.0 0.0 0.0 0.0 5.3
ATTGTTGGGG 0.0 0.0 0.0 0.0 0.0 5.3
GGGGGCTGGG 0.0 0.0 0.0 0.0 0.0 5.3
GTCAGGAGCT 0.0 0.0 0.0 0.0 0.0 5.3
TTTTGGGGTA 0.0 0.0 0.0 0.0 0.0 5.3
AATCTTAAAA 101353 EST 21475 ESTs, Weakly similar to 17-beta-hydroxysteroid dehydrogenase type II [M.musculus] 0.0 0.0 0.0 0.0 0.0 4.2
AGACCCCGTG 1129 repeat family 3 gene 0.0 0.0 0.0 0.0 0.0 4.2
ATGATGTTAG 125552 ESTs 0.0 0.0 0.0 0.0 0.0 4.2
AATCCTGTAG 127316 ESTs 0.0 0.0 0.0 0.0 0.0 4.2
AAATGAATAA 12848 signal recognition particle 54 kDa 160335 Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410071O21, full insert sequence 42053 histocompatibility 2, T region locus 18 0.0 0.0 0.0 0.0 0.0 4.2
AGGCACTATC 131360 ESTs 0.0 0.0 0.0 0.0 0.0 4.2
GTGATTCCAC 155288 ESTs 0.0 0.0 0.0 0.0 0.0 4.2
TTTTTGTTTT 156663 ESTs 0.0 0.0 0.0 0.0 0.0 4.2
GTGAATTCAG 157001 RIKEN cDNA 5730511P15 gene 0.0 0.0 0.0 0.0 0.0 4.2
TGTGTTTTTC 166631 ESTs 19130 RIKEN cDNA 1110059L23 gene 0.0 0.0 0.0 0.0 0.0 4.2
GCTCCAGCCA 176934 ESTs 0.0 0.0 0.0 0.0 0.0 4.2
ATGTATTTTT 24095 ESTs 0.0 0.0 0.0 0.0 0.0 4.2
GCTTCAAAGA 24519 Mus musculus clone L3 variable group of 2-cell-stage gene family mRNA, complete cds 10758 Mus musculus clone L5 uniform group of 2-cell-stage gene family mRNA, complete cds 0.0 0.0 0.0 0.0 0.0 4.2
TAGGTTGTCT 254 translationally regulated transcript (21 kDa) 0.0 0.0 0.0 0.0 0.0 4.2
AATGTCAGCT 27489 ESTs, Highly similar to KIAA1096 protein [H.sapiens] 28189 RIKEN cDNA 1300002M12 gene 0.0 0.0 0.0 0.0 0.0 4.2
AAAATTCCAA 28544 RIKEN cDNA 1600012H06 gene 0.0 0.0 0.0 0.0 0.0 4.2
TTCTTTCTCT 2923 interleukin 2 receptor, gamma chain 30541 ESTs, Weakly similar to KIAA0403 [H.sapiens] 41023 RIKEN cDNA 1110021E09 gene 0.0 0.0 0.0 0.0 0.0 4.2
ATGATGGAGG 32009 RIKEN cDNA 5830406J20 gene 0.0 0.0 0.0 0.0 0.0 4.2
GACTGATCCT 36433 EST 0.0 0.0 0.0 0.0 0.0 4.2
ACCATCTGTA 37491 ESTs 0.0 0.0 0.0 0.0 0.0 4.2
AAATTTATAC 37835 ribosomal protein L7 44228 Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110053A09, full insert sequence 0.0 0.0 0.0 0.0 0.0 4.2
TAAATGCTCT 40013 ESTs 0.0 0.0 0.0 0.0 0.0 4.2
TTTGATTGTC 41269 ESTs 0.0 0.0 0.0 0.0 0.0 4.2
AATTAACTGA 87389 ESTs, Moderately similar to KIAA1336 protein [H.sapiens] 0.0 0.0 0.0 0.0 0.0 4.2
AAATTAAGAA 87653 ESTs 0.0 0.0 0.0 0.0 0.0 4.2
AAGCTCAAGA 0.0 0.0 0.0 0.0 0.0 4.2
CAGCCACCTG 0.0 0.0 0.0 0.0 0.0 4.2
CAGTACTGCA 0.0 0.0 0.0 0.0 0.0 4.2
CATCGGGAAC 0.0 0.0 0.0 0.0 0.0 4.2
CCACAGCTCT 0.0 0.0 0.0 0.0 0.0 4.2
CCCTTAATCC 0.0 0.0 0.0 0.0 0.0 4.2
GAAAGAGTAA 0.0 0.0 0.0 0.0 0.0 4.2
GACGCCGCCA 0.0 0.0 0.0 0.0 0.0 4.2
GATTTATGAA 0.0 0.0 0.0 0.0 0.0 4.2
GCACCATCGG 0.0 0.0 0.0 0.0 0.0 4.2
GTAACCGTTA 0.0 0.0 0.0 0.0 0.0 4.2
GTCTGACCCT 0.0 0.0 0.0 0.0 0.0 4.2
GTGCTTACCC 0.0 0.0 0.0 0.0 0.0 4.2
TGGAACCTAA 0.0 0.0 0.0 0.0 0.0 4.2
TGTTGCATAT 0.0 0.0 0.0 0.0 0.0 4.2
TTGTACTTCA 0.0 0.0 0.0 0.0 0.0 4.2
TTGTCTGGAG 0.0 0.0 0.0 0.0 0.0 4.2
TTTGGAGATA 0.0 0.0 0.0 0.0 0.0 4.2
AGGACCTGAG 102098 ESTs 174958 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
GTGGTACAGG 103882 EST 181973 RIKEN cDNA 1300014E15 gene 297 melanoma X-actin 0.0 0.0 0.0 0.0 0.0 3.2
GGAATCCGCT 10530 acetyl-Coenzyme A dehydrogenase, medium chain 0.0 0.0 0.0 0.0 0.0 3.2
TAGGTCCCAA 108370 ESTs, Highly similar to organic anion transporter protein 3 [R.norvegicus] 0.0 0.0 0.0 0.0 0.0 3.2
AGAGATGGTT 11204 ESTs, Highly  similar to UNR PROTEIN [Rattus norvegicus] 3257 growth arrest specific 7 0.0 0.0 0.0 0.0 0.0 3.2
TAGAGCTGCT 11747 DNA segment, Chr 10, ERATO Doi 739, expressed 0.0 0.0 0.0 0.0 0.0 3.2
GGTGCTGCCC 122738 RIKEN cDNA 6330406J24 gene 41479 RIKEN cDNA 9530063M10 gene 0.0 0.0 0.0 0.0 0.0 3.2
GTTTGATGAT 1232 mammary tumor virus locus 43 44075 RIKEN cDNA 1500001L03 gene 0.0 0.0 0.0 0.0 0.0 3.2
TGAAATGTAA 127292 EST 138125 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
CAATATTAAA 131276 ESTs, Weakly similar to PCAF associated factor 65 alpha [H.sapiens] 0.0 0.0 0.0 0.0 0.0 3.2
CTAATAAATT 131503 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
CAGGGAGAAC 137416 EST 0.0 0.0 0.0 0.0 0.0 3.2
CTAGGTAAGC 138977 EST 35583 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
AATTTCTTGT 141593 hypothetical protein, MNCb-2990 0.0 0.0 0.0 0.0 0.0 3.2
GAAATCTTTA 142293 RIKEN cDNA 2310042C07 gene 181585 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
GATACTTTTT 142866 Mus musculus pigpen protein mRNA, complete cds 0.0 0.0 0.0 0.0 0.0 3.2
GAGGCAGGAG 153500 RIKEN cDNA 4930523M17 gene 38856 ESTs, Weakly similar to S33478 hypothetical protein 2 - rat [R.norvegicus] 5189 phospholipase A2, group IIC 0.0 0.0 0.0 0.0 0.0 3.2
TGCCATCATA 153856 DNA segment, Chr 2, ERATO Doi 640, expressed 19306 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
AGACAGAAAG 154136 RIKEN cDNA 2500003M10 gene 0.0 0.0 0.0 0.0 0.0 3.2
AGATCCTGTC 160087 RIKEN cDNA 9530047P18 gene 35645 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
GTGGATGATT 160152 RIKEN cDNA 4930455M05 gene 0.0 0.0 0.0 0.0 0.0 3.2
AAGAAAACCT 16423 RIKEN cDNA 2410039E09 gene 0.0 0.0 0.0 0.0 0.0 3.2
ATGGATTTGG 16553 neural precursor cell expressed, developmentally down-regulated gene 4 0.0 0.0 0.0 0.0 0.0 3.2
TGGTTCTGGA 16553 neural precursor cell expressed, developmentally down-regulated gene 4 41102 RIKEN cDNA 2610030H06 gene 45148 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
TATGTTTTTC 172 lysyl oxidase 0.0 0.0 0.0 0.0 0.0 3.2
GAGAGACCCA 173178 RIKEN cDNA 1700085D22 gene 61080 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
AAAATGAAAA 178015 ESTs 36511 RIKEN cDNA 0610033O15 gene 0.0 0.0 0.0 0.0 0.0 3.2
AATGCAAAAA 178029 ESTs 22543 ESTs, Highly similar to JC2472 brain and reproductive organ-expressed protein [H.sapiens] 0.0 0.0 0.0 0.0 0.0 3.2
ATGACAGTTT 181912 ESTs 64105 EST 0.0 0.0 0.0 0.0 0.0 3.2
CACTCACACA 182112 RIKEN cDNA 1200007D05 gene 27705 DNA primase, p58 subunit 29884 RIKEN cDNA 2310032J20 gene 0.0 0.0 0.0 0.0 0.0 3.2
AGCTCCCCGT 18218 ganglioside-induced differentiation-associated-protein 1 0.0 0.0 0.0 0.0 0.0 3.2
CTTTCAATTA 182912 RIKEN cDNA 1010001P14 gene 0.0 0.0 0.0 0.0 0.0 3.2
ACCTTGGTGT 18630 acyl-Coenzyme A dehydrogenase, very long chain 0.0 0.0 0.0 0.0 0.0 3.2
AAGGTGCACA 18810 RIKEN cDNA 2900028O21 gene 0.0 0.0 0.0 0.0 0.0 3.2
TATGTAAAGC 21289 ribosomal protein S12 0.0 0.0 0.0 0.0 0.0 3.2
GCAGAAGCAG 21401 RIKEN cDNA 1300012C07 gene 0.0 0.0 0.0 0.0 0.0 3.2
TTAATGTGAG 21440 Mus musculus quiescent cell proline dipeptidase precursor, mRNA, complete cds 23789 SNF1-like kinase 54181 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
CATTTTCTCT 23128 ESTs 31512 ring finger protein 2 0.0 0.0 0.0 0.0 0.0 3.2
GTACTTTCTC 24304 Mus musculus CGI-74-like SR-rich protein mRNA, complete cds 0.0 0.0 0.0 0.0 0.0 3.2
AAGCCAAAAA 24465 EST AI452337 28853 ESTs, Moderately similar to C211_HUMAN PUTATIVE SURFACE GLYCOPROTEIN C21ORF1 PRECURSOR [H.sapiens] 0.0 0.0 0.0 0.0 0.0 3.2
TAAATTAAAT 24647 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
AACCAAGTGG 26587 thyroid hormone receptor alpha 0.0 0.0 0.0 0.0 0.0 3.2
AGTTCAAAGC 28458 Mus musculus LAB300 (Lab300) mRNA, complete cds 0.0 0.0 0.0 0.0 0.0 3.2
AATAAAGCTG 28589 RIKEN cDNA 4631427C17 gene 0.0 0.0 0.0 0.0 0.0 3.2
AAATTCATAA 29344 tumor differentially expressed 1, like 0.0 0.0 0.0 0.0 0.0 3.2
AGTGTGTGTG 29999 ESTs, Moderately  similar to ISOLEUCYL-TRNA SYNTHETASE [Staphylococcus aureus] 0.0 0.0 0.0 0.0 0.0 3.2
GGCAACATAT 3146 transcription factor 20 0.0 0.0 0.0 0.0 0.0 3.2
TAATAAAACA 32455 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
CAGGCAGAGC 35743 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
ACTTAGAGAG 37695 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
GAGAGTTAAA 37703 ESTs 9495 kidney-derived aspartic protease-like protein 0.0 0.0 0.0 0.0 0.0 3.2
GGGATGCTGC 3871 phosphatidylserine synthase 2 70619 RIKEN cDNA 1810059C13 gene 0.0 0.0 0.0 0.0 0.0 3.2
GCAATGGTTT 41897 RIKEN cDNA 4933422O14 gene 0.0 0.0 0.0 0.0 0.0 3.2
CCCATCCGGA 42578 ribosomal protein L13 0.0 0.0 0.0 0.0 0.0 3.2
TTTGTCACCT 46761 RIKEN cDNA 2610042J10 gene 5203 RIKEN cDNA 1500009C23 gene 0.0 0.0 0.0 0.0 0.0 3.2
CTTATGAAGA 52322 ESTs 0.0 0.0 0.0 0.0 0.0 3.2
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