Table S2. SAGE tag levels for nonretinal, P10.5, adult retina, and ONL libraries
This lists a full breakdown of all SAGE tags from the following libraries: 3T3 cells, hypothalamus, P10.5 crx-/-, P10.5 crx+/+, adult whole retina and adult microdissected outer nuclear layer (ONL).  Tag totals are normalized to 55,000.  The Gene field contains the mouse Unigene number assignment for the tag followed by the gene name.  Tags with multiple predicted identities are listed together in the Gene column.
Tag Gene 3t3 hypothalamus P10.5 crx-/- P10.5 crx+/+ adult retina ONL
TTCCAGTAAT 1773 SH3 domain protein 2B 0.0 0.0 4.1 0.0 1.0 0.0
GCTGCAGAGT 20543 Mus musculus Pumilio 2 (Pumm2) mRNA, complete cds 35473 ESTs 0.0 0.0 4.1 0.0 1.0 0.0
TCTCCCTTAA 23230 RIKEN cDNA 2610510B01 gene 0.0 0.0 4.1 0.0 1.0 0.0
AGTAGCTTAG 28023 mitochondrial carrier homolog 2 0.0 0.0 4.1 0.0 1.0 0.0
CCTCAGTTTA 28184 ESTs, Highly similar to MEFD MOUSE MYOCYTE-SPECIFIC ENHANCER FACTOR 2D [M.musculus] 0.0 0.0 4.1 0.0 1.0 0.0
GAGATGTTGG 29760 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 3475 retinoid X receptor gamma 0.0 0.0 4.1 0.0 1.0 0.0
TTTGTCAGAT 3235 DNA segment, Chr 3, Wayne State University 161, expressed 0.0 0.0 4.1 0.0 1.0 0.0
ACACAGAGCT 0.0 0.0 4.1 0.0 1.0 0.0
ATGAGTACAG 147693 DNA segment, Chr 7, ERATO Doi 795, expressed 0.0 0.0 4.1 0.0 0.0 2.1
TTAGAAACTG 182517 RIKEN cDNA 2610510D13 gene 0.0 0.0 4.1 0.0 0.0 2.1
AGATTTTTCT 30795 ESTs 0.0 0.0 4.1 0.0 0.0 2.1
CAGAGGGCAA 0.0 0.0 4.1 0.0 0.0 2.1
ACAGAGTCCT 19804 spastic paraplegia 4 homolog (human) 27102 RIKEN cDNA 2410112I15 gene 0.0 0.0 4.1 0.0 0.0 1.1
GGAAGACAGA 35797 ESTs, Weakly similar to T41751 l-afadin - rat [R.norvegicus] 0.0 0.0 4.1 0.0 0.0 1.1
CCTCGTCCCC 41038 ESTs, Highly  similar to ZINC FINGER PROTEIN 42 [Homo sapiens] 0.0 0.0 4.1 0.0 0.0 1.1
AGATAAAAAC 141312 procollagen, type IX, alpha 3 0.0 0.0 4.1 0.0 0.0 0.0
GCTTCCAGAC 147591 ESTs, Moderately similar to RNaseP protein P38 [H.sapiens] 0.0 0.0 4.1 0.0 0.0 0.0
ACCCCATTTA 156692 RIKEN cDNA 2310022A04 gene 31845 RIKEN cDNA 1810019D05 gene 0.0 0.0 4.1 0.0 0.0 0.0
AACCATCACT 16771 histocompatibility 2, K region 168728 ESTs 0.0 0.0 4.1 0.0 0.0 0.0
AAGTACTACC 171558 RIKEN cDNA 2200001D17 gene 0.0 0.0 4.1 0.0 0.0 0.0
TTTCTTCTCT 20805 RIKEN cDNA 2410141M05 gene 82558 ESTs, Highly similar to KIAA1386 protein [H.sapiens] 0.0 0.0 4.1 0.0 0.0 0.0
AAACTATTGA 21905 RAB2, member RAS oncogene family 0.0 0.0 4.1 0.0 0.0 0.0
TGTTCCCTCA 24220 RIKEN cDNA 2310003F16 gene 0.0 0.0 4.1 0.0 0.0 0.0
TCTCTCTATT 25789 casein alpha 0.0 0.0 4.1 0.0 0.0 0.0
ACCGTCTTCC 26242 ESTs, Highly similar to T00361 hypothetical protein KIAA0678 [H.sapiens] 0.0 0.0 4.1 0.0 0.0 0.0
GGGATATAAA 27897 heat shock protein, DNAJ-like 2 6483 phospholipase D3 0.0 0.0 4.1 0.0 0.0 0.0
ATTCCATCTC 28237 Mus musculus mRNA for syntaxin 12, complete cds 0.0 0.0 4.1 0.0 0.0 0.0
TACGTAACGT 28366 RIKEN cDNA 1300012G03 gene 0.0 0.0 4.1 0.0 0.0 0.0
TTTTTACATC 3227 inter-alpha trypsin inhibitor, heavy chain 1 0.0 0.0 4.1 0.0 0.0 0.0
GAAGGAGCTG 3374 ephrin B1 0.0 0.0 4.1 0.0 0.0 0.0
TCCCCTGGAA 41015 ESTs 0.0 0.0 4.1 0.0 0.0 0.0
TTTCCTCCTG 41711 ESTs, Moderately similar to neurodegeneration-associated protein 1 [R.norvegicus] 0.0 0.0 4.1 0.0 0.0 0.0
CATTCAGAGA 41926 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 (9 kDa, MLRQ) 0.0 0.0 4.1 0.0 0.0 0.0
GCACACACTC 45078 RIKEN cDNA 4632433K11 gene 83288 EST 0.0 0.0 4.1 0.0 0.0 0.0
CCTTCTTTCA 0.0 0.0 4.1 0.0 0.0 0.0
TAAGGATTTC 0.0 0.0 4.1 0.0 0.0 0.0
GAAAATCAAA 133553 RIKEN cDNA 2610035D17 gene 95707 RIKEN cDNA A930007I01 gene 0.0 0.0 3.1 20.1 38.7 51.6
TAGATTTGGG 179988 ESTs 182082 raf-related oncogene 0.0 0.0 3.1 9.5 10.2 3.2
CAAGTGGTAC 71600 ESTs 0.0 0.0 3.1 9.5 1.0 4.2
GCGATCTGCC 143811 basic helix-loop-helix (bHLH) gene, class B, Beta3 0.0 0.0 3.1 9.5 1.0 1.1
AGCTGGGACC 2965 rhodopsin 0.0 0.0 3.1 8.5 87.6 28.4
GATGGCTGGA 0.0 0.0 3.1 7.4 9.2 1.1
TCACTGCTCA 18856 mitogen-activated protein kinase 6 0.0 0.0 3.1 7.4 2.0 0.0
TCTTGGTGAC 31161 ESTs 0.0 0.0 3.1 6.3 12.2 10.5
GACTTGGACT 4471 RIKEN cDNA 1810041M12 gene 0.0 0.0 3.1 6.3 5.1 5.3
GAAAGTACTC 23879 ESTs 0.0 0.0 3.1 6.3 2.0 3.2
TTTTTGGCCC 32847 ESTs 0.0 0.0 3.1 6.3 2.0 2.1
CCCAGGCTTG 22845 Rous sarcoma oncogene 0.0 0.0 3.1 6.3 2.0 1.1
TTTCAGCTTC 22717 ESTs 29408 DNA segment, Chr 8, ERATO Doi 738, expressed 0.0 0.0 3.1 6.3 1.0 0.0
GCAGTTTAAA 28192 RIKEN cDNA 9430077F19 gene 0.0 0.0 3.1 6.3 0.0 2.1
ATGCACAGAT 2551 SEC22 vesicle trafficking protein-like 1 (S. cerevisiae) 0.0 0.0 3.1 5.3 6.1 1.1
CAGTGTTACG 154307 RIKEN cDNA 0610009H04 gene 0.0 0.0 3.1 5.3 5.1 1.1
TTTGAGAAAA 784 next to the Brca1 0.0 0.0 3.1 5.3 4.1 0.0
TTATGTATTA 136988 ESTs 0.0 0.0 3.1 5.3 3.1 12.6
GAGGGACATT 44213 RIKEN cDNA 1810073E21 gene 4729 dual specificity phosphatase 2 0.0 0.0 3.1 5.3 0.0 1.1
GTTTCTCCGG 142101 RIKEN cDNA 2310045N01 gene 0.0 0.0 3.1 5.3 0.0 0.0
ATTAATCAGT 26492 ESTs, Highly similar to AF173682 1 system A transporter isoform 2 [R.norvegicus] 0.0 0.0 3.1 5.3 0.0 0.0
TGGAGTTGGA 42850 RIKEN cDNA 2510008M08 gene 0.0 0.0 3.1 5.3 0.0 0.0
CAATCATAGG 34641 autocrine motility factor receptor 0.0 0.0 3.1 4.2 2.0 12.6
TTTCTGATAC 28184 ESTs, Highly similar to MEFD MOUSE MYOCYTE-SPECIFIC ENHANCER FACTOR 2D [M.musculus] 0.0 0.0 3.1 4.2 2.0 3.2
GTATTTATCT 34851 ESTs 0.0 0.0 3.1 4.2 2.0 2.1
CTTAAATAAA 24149 ESTs 3057 reelin 0.0 0.0 3.1 4.2 1.0 2.1
TCAAATGTGT 0.0 0.0 3.1 4.2 1.0 1.1
AGATCTTGTT Chx10-1 short 0.0 0.0 3.1 4.2 1.0 0.0
GTTGTAAATA 28965 RIKEN cDNA 0710007A14 gene 29186 DNA J protein 0.0 0.0 3.1 4.2 0.0 4.2
CGCGTTGTCT 22991 ESTs 0.0 0.0 3.1 4.2 0.0 2.1
AAAAACATCT 162527 EST 16553 neural precursor cell expressed, developmentally down-regulated gene 4 30709 RIKEN cDNA 1200011E13 gene 0.0 0.0 3.1 4.2 0.0 1.1
TGGATTAATA 133375 ESTs 44201 RIKEN cDNA 2610022G08 gene 0.0 0.0 3.1 4.2 0.0 0.0
TGTTGGGAAA 26564 ESTs 3484 Niemann Pick type C1 0.0 0.0 3.1 4.2 0.0 0.0
ACAGCGTATT 35695 ESTs, Highly  similar to GLUTAMINASE, LIVER ISOFORM PRECURSOR [Rattus norvegicus] 0.0 0.0 3.1 4.2 0.0 0.0
AAGCATTACA 0.0 0.0 3.1 4.2 0.0 0.0
TGATGTTCCA 27809 ESTs, Highly similar to TTF-I interacting peptide 5 [H.sapiens] 0.0 0.0 3.1 3.2 5.1 6.3
GAGCCTGCCA 177698 ESTs 0.0 0.0 3.1 3.2 5.1 1.1
CAATTAGTTG 23256 ESTs 30103 RIKEN cDNA 1110014L17 gene 0.0 0.0 3.1 3.2 5.1 1.1
TTCCCTGACA 23146 ESTs 0.0 0.0 3.1 3.2 5.1 0.0
ACTTTGAGCC 29735 RIKEN cDNA 0610006H10 gene 32883 RIKEN cDNA 2210021G21 gene 0.0 0.0 3.1 3.2 3.1 2.1
CACATCAATA 23824 ESTs, Highly similar to unnamed protein product [H.sapiens] 0.0 0.0 3.1 3.2 2.0 4.2
AAGCTGGGTA 30116 RIKEN cDNA 5730494N06 gene 0.0 0.0 3.1 3.2 2.0 1.1
GTGGACTATT 32950 GTF2I repeat domain-containing 1 0.0 0.0 3.1 3.2 2.0 1.1
TAGTCCAGGC 117577 ESTs 177133 ESTs 0.0 0.0 3.1 3.2 2.0 0.0
ACCTTGGAAG 182440 apolipoprotein CI 0.0 0.0 3.1 3.2 2.0 0.0
GGGTCCTCTT 31436 myeloid ecotropic viral integration site-related gene 1 0.0 0.0 3.1 3.2 1.0 3.2
GAATCTTTCC 22491 RIKEN cDNA 0910001J09 gene 25416 DNA segment, Chr 8, ERATO Doi 790, expressed 0.0 0.0 3.1 3.2 1.0 2.1
CGTTCACCAT 41664 Mus musculus 10 days embryo cDNA, RIKEN full-length enriched library, clone:2610529E18, full insert sequence 0.0 0.0 3.1 3.2 1.0 2.1
GTCTCTGCTT 160277 Mus musculus 10, 11 days embryo cDNA, RIKEN full-length enriched library, clone:2810430I11, full insert sequence 30557 Mus musculus 10 days embryo cDNA, RIKEN full-length enriched library, clone:2610204E15, full insert sequence 0.0 0.0 3.1 3.2 1.0 1.1
AAGGGAAGTG 21593 RIKEN cDNA 2610028P08 gene 27819 ESTs 0.0 0.0 3.1 3.2 1.0 1.1
TCTGTGCTTT 29148 RIKEN cDNA 2400008B06 gene 0.0 0.0 3.1 3.2 1.0 1.1
TTGAATGAAG 30882 RIKEN cDNA 6330408K17 gene 0.0 0.0 3.1 3.2 1.0 1.1
TATATGTTGA 0.0 0.0 3.1 3.2 1.0 1.1
TTAGACTCAA 21840 RIKEN cDNA 4930542G03 gene 3444 bromodomain-containing 2 0.0 0.0 3.1 3.2 0.0 4.2
CCTATATCCC 150215 ESTs 0.0 0.0 3.1 3.2 0.0 2.1
TTTTGTAATT 29791 site-1 protease 0.0 0.0 3.1 3.2 0.0 2.1
CCATCAATCA 4539 parotid secretory protein 0.0 0.0 3.1 3.2 0.0 2.1
CTCTCTTCTG 133667 ESTs 21539 DNA segment, Chr 1, University of California at Los Angeles 3 336 septin 2 0.0 0.0 3.1 3.2 0.0 1.1
TCTAACTCTG 182760 ESTs 566 origin recognition complex, subunit 5 homolog (S. cerevisiae) 0.0 0.0 3.1 3.2 0.0 1.1
ATTGGAAGGT 27441 ESTs 0.0 0.0 3.1 3.2 0.0 1.1
AAGGAGATTA 2186 RNA polymerase II 3 0.0 0.0 3.1 3.2 0.0 0.0
GTGAAATGTT 29253 RIKEN cDNA 2310032N20 gene 0.0 0.0 3.1 3.2 0.0 0.0
AATCCCAAAC 33549 ESTs 0.0 0.0 3.1 3.2 0.0 0.0
TCGCAGTAAT 35584 S-phase kinase-associated protein 2 (p45) 0.0 0.0 3.1 3.2 0.0 0.0
GGGAATTGCG 0.0 0.0 3.1 3.2 0.0 0.0
CTAACTGATA 28005 RIKEN cDNA 2410125H22 gene 0.0 0.0 3.1 2.1 8.1 0.0
TGCCTCATAA 37281 ESTs 0.0 0.0 3.1 2.1 5.1 2.1
TTGTACAGGT 25963 ESTs 0.0 0.0 3.1 2.1 5.1 1.1
GTCATCTTTT 23636 ESTs 0.0 0.0 3.1 2.1 4.1 0.0
CCCCTGTGTA 38241 interleukin 1 receptor-associated kinase 0.0 0.0 3.1 2.1 4.1 0.0
CGTGGATCCC 150226 ESTs 2480 cyclin-dependent kinase inhibitor 1C (P57) 0.0 0.0 3.1 2.1 3.1 1.1
ACACACACAC 164187 RIKEN cDNA 2610524B01 gene 0.0 0.0 3.1 2.1 3.1 1.1
AAGCTAAGCA 24372 ESTs, Weakly similar to HC1 ORF [M.musculus] 0.0 0.0 3.1 2.1 3.1 1.1
CCTCTTCCCC 36695 RIKEN cDNA 1500031H01 gene 0.0 0.0 3.1 2.1 2.0 3.2
TCCTACATCT 0.0 0.0 3.1 2.1 2.0 3.2
ATTTTCTCAA 21802 testis expressed gene 189 0.0 0.0 3.1 2.1 2.0 1.1
GACTCAGCTC 24707 RIKEN cDNA 2610319K07 gene 0.0 0.0 3.1 2.1 2.0 1.1
GGCTTCTCCT 40334 ESTs, Weakly similar to dJ1183I21.2 [H.sapiens] 0.0 0.0 3.1 2.1 2.0 1.1
CCCCCCATCC 21571 RIKEN cDNA 2310015O17 gene 22218 RIKEN cDNA 1300013N08 gene 0.0 0.0 3.1 2.1 2.0 0.0
CTCCACTATG 160443 Mus musculus glycine receptor beta-subunit gene, partial cds; and retrotransposon L1spa endonuclease/reverse transcriptase gene, complete cds 160260 Mouse L1 repetitive element, complete sequence 160191 Mouse L1Md-A13 repetitive sequence 160427 Mouse L1Md-A2 repetitive element with two open reading frames 160456 Mus musculus domesticus L1 retrotransposon, Tf subfamily L1Md-Tf14, partial sequence 160458 Mus musculus domesticus L1 retrotransposon, Tf subfamily L1Md-Tf29, partial sequence 160474 Mus musculus DNA, L1 element insertion in intron 3 of Mitf gene 57159 L1 repeat, Tf subfamily, member 5 57160 L1 repeat, Tf subfamily, member 6 57161 L1 repeat, Tf subfamily, member 8 57162 L1 repeat, Tf subfamily, member 9 57164 L1 repeat, Tf subfamily, member 17 57165 L1 repeat, Tf subfamily, member 23 57166 L1 repeat, Tf subfamily, member 18 57167 L1 repeat, Tf subfamily, member 26 57169 L1 repeat, Tf subfamily, member 30 0.0 0.0 3.1 2.1 1.0 8.4
TGGTTGCTTG 144835 ESTs 0.0 0.0 3.1 2.1 1.0 3.2
CTTAAACAAA 34310 ESTs 0.0 0.0 3.1 2.1 1.0 3.2
GGAGCTGTGG 0.0 0.0 3.1 2.1 1.0 3.2
CTTACGATTC 10303 SIK similar protein 0.0 0.0 3.1 2.1 1.0 1.1
CATAGTGTAT 28285 RIKEN cDNA 2700023B17 gene 0.0 0.0 3.1 2.1 1.0 1.1
AGCACAAGTT 34477 ESTs 0.0 0.0 3.1 2.1 1.0 1.1
GCTTTGGTCT 0.0 0.0 3.1 2.1 1.0 1.1
AGACACCTGG 1186 carbonic anhydrase 2 0.0 0.0 3.1 2.1 1.0 0.0
GGATTTCACC 124937 ESTs 0.0 0.0 3.1 2.1 1.0 0.0
CTGGCTCTCT 181811 ESTs 41747 Mus musculus 10, 11 days embryo cDNA, RIKEN full-length enriched library, clone:2810490L08, full insert sequence 0.0 0.0 3.1 2.1 1.0 0.0
GGTGCAGTGG 39509 ESTs 0.0 0.0 3.1 2.1 1.0 0.0
GTGGGTTTTG 40036 ESTs, Weakly similar to S59856 collagen alpha 1(III) chain precursor - mouse [M.musculus] 0.0 0.0 3.1 2.1 1.0 0.0
ACTGTCTCCC 44218 RIKEN cDNA 2610042O14 gene 0.0 0.0 3.1 2.1 1.0 0.0
GCCTCTCAGT 5545 RIKEN cDNA 2410001M24 gene 0.0 0.0 3.1 2.1 1.0 0.0
GAAAGAAATA 127006 ESTs 0.0 0.0 3.1 2.1 0.0 3.2
AAACTTCAGA 18555 ESTs 0.0 0.0 3.1 2.1 0.0 3.2
CTTTGGGAGT 33881 RIKEN cDNA 1300010M03 gene 0.0 0.0 3.1 2.1 0.0 3.2
TCCTAACTTA 638 ESTs 0.0 0.0 3.1 2.1 0.0 3.2
TGACTTGGTA 29912 RIKEN cDNA 1700020H17 gene 0.0 0.0 3.1 2.1 0.0 2.1
TGAGGCCCTA 30519 ESTs 0.0 0.0 3.1 2.1 0.0 2.1
AAATGCAAGG 16898 3-phosphoglycerate dehydrogenase 28906 ESTs 0.0 0.0 3.1 2.1 0.0 1.1
AAAAGAATCT 2003 transformed mouse 3T3 cell double minute 1 0.0 0.0 3.1 2.1 0.0 1.1
GCCTGGCCCT 26207 ESTs, Highly similar to OXRTGU L-gulonolactone oxidase [R.norvegicus] 0.0 0.0 3.1 2.1 0.0 1.1
CTTTTAGGAT 28697 RIKEN cDNA 2310032D16 gene 0.0 0.0 3.1 2.1 0.0 1.1
AAATGGCTGG 41399 ESTs, Weakly similar to BcDNA:LD21720 gene product [D.melanogaster] 0.0 0.0 3.1 2.1 0.0 1.1
TAATCAAGAG 0.0 0.0 3.1 2.1 0.0 1.1
TGAAAATATT 10001 holocytochrome c synthetase 102923 ESTs 0.0 0.0 3.1 2.1 0.0 0.0
CTGACTTAAG 129520 ESTs 23926 RIKEN cDNA 2810004N20 gene 56955 T-cell acute lymphocytic leukemia 2 0.0 0.0 3.1 2.1 0.0 0.0
TTTCTTAATG 154298 RIKEN cDNA 1810012I05 gene 0.0 0.0 3.1 2.1 0.0 0.0
CACACTTGTA 177859 ESTs, Weakly similar to AF188634 1 F protein [D.melanogaster] 0.0 0.0 3.1 2.1 0.0 0.0
GCTTAATGTA 29896 ribosomal protein L21 0.0 0.0 3.1 2.1 0.0 0.0
GTAACACAAA 34220 ESTs 0.0 0.0 3.1 2.1 0.0 0.0
TAGTTCCTAT 36894 transcription factor 12 0.0 0.0 3.1 2.1 0.0 0.0
GGCTCACAGC 41910 RIKEN cDNA 2310047I09 gene 0.0 0.0 3.1 2.1 0.0 0.0
TGGAAACTGG 4381 special AT-rich sequence binding protein 1 0.0 0.0 3.1 2.1 0.0 0.0
GCTCACAATG 45563 ESTs 0.0 0.0 3.1 2.1 0.0 0.0
GCAGAAAATT 87700 RIKEN cDNA 4930443C24 gene 0.0 0.0 3.1 2.1 0.0 0.0
ACAACAGAGG 0.0 0.0 3.1 2.1 0.0 0.0
GCTTGCTGCC 0.0 0.0 3.1 2.1 0.0 0.0
TATGAATTGT 0.0 0.0 3.1 2.1 0.0 0.0
TGTCTTACAA 0.0 0.0 3.1 1.1 5.1 3.2
GTTTCATTAT 46005 RIKEN cDNA 2600011C06 gene 0.0 0.0 3.1 1.1 4.1 3.2
TTGTGTGTGG 0.0 0.0 3.1 1.1 4.1 3.2
GCTTGACATA 154153 RIKEN cDNA 1110034O07 gene 0.0 0.0 3.1 1.1 4.1 1.1
GCCCTTCTGG 83213 ESTs 0.0 0.0 3.1 1.1 4.1 1.1
AAGCGATTCT 0.0 0.0 3.1 1.1 4.1 1.1
GGCAACAGGA 102315 ESTs 35714 RIKEN cDNA 1810009N02 gene 0.0 0.0 3.1 1.1 3.1 3.2
TTTTATAATT 28717 ESTs, Weakly similar to cDNA EST yk282b7.5 comes from this gene [C.elegans] 0.0 0.0 3.1 1.1 3.1 2.1
TCTCTTGGTG 46262 ESTs, Weakly similar to JAK3 MOUSE TYROSINE-PROTEIN KINASE JAK3 [M.musculus] 0.0 0.0 3.1 1.1 3.1 2.1
CGCACAGAAG 17392 basic FGF repressed, Zic binding protein 31013 ESTs 0.0 0.0 3.1 1.1 3.1 0.0
TGCATCTTAT 24 heterogeneous nuclear ribonucleoprotein A/B 0.0 0.0 3.1 1.1 3.1 0.0
GACAAGTATA 100064 ESTs, Moderately similar to oligophrenin 1 [H.sapiens] 16767 heterogeneous nuclear ribonucleoprotein A2/B1 0.0 0.0 3.1 1.1 2.0 5.3
TGGTTTGCAT 0.0 0.0 3.1 1.1 2.0 4.2
ATTTGAGGGT 21114 RIKEN cDNA 8430421I07 gene 0.0 0.0 3.1 1.1 2.0 3.2
CCTTTCAAAT 27796 hypothetical protein 0.0 0.0 3.1 1.1 2.0 3.2
ATGTTGAAAA 0.0 0.0 3.1 1.1 2.0 3.2
GCTTTTTACC 36756 ESTs 0.0 0.0 3.1 1.1 2.0 2.1
GAATCAGCAG 89623 ESTs 0.0 0.0 3.1 1.1 2.0 1.1
AACAGGGAGC 183076 RIKEN cDNA 2510039O18 gene 0.0 0.0 3.1 1.1 2.0 0.0
TGTGCAGCTC 33872 RIKEN cDNA 5033405M01 gene 0.0 0.0 3.1 1.1 2.0 0.0
CACAGAAGAA 40070 ESTs 0.0 0.0 3.1 1.1 2.0 0.0
CCTCCAGTCT 45134 RIKEN cDNA 1300018I17 gene 0.0 0.0 3.1 1.1 2.0 0.0
ACCTCTGCAT 0.0 0.0 3.1 1.1 2.0 0.0
TTGTGATTTG 0.0 0.0 3.1 1.1 2.0 0.0
AAGCCAAAGG 20921 immunosuperfamily protein Bl2 0.0 0.0 3.1 1.1 1.0 4.2
CACTTTACTT 29730 four jointed box 1 (Drosophila) 0.0 0.0 3.1 1.1 1.0 4.2
GGGATCCTGG 0.0 0.0 3.1 1.1 1.0 4.2
GTTGCCAGCC 71887 Mus musculus 11 kDa secreted protein precursor, mRNA, complete cds 28382 RIKEN cDNA 2410003J24 gene 0.0 0.0 3.1 1.1 1.0 3.2
GGACGCACTT 0.0 0.0 3.1 1.1 1.0 3.2
TCTTCTCTCA 28474 hypothetical protein, clone MTA.D02.090 0.0 0.0 3.1 1.1 1.0 2.1
GATGCTTTGG 29255 ESTs 87368 RIKEN cDNA 4930503B20 gene 0.0 0.0 3.1 1.1 1.0 2.1
ACCTCCCTAC 1100 inhibin alpha 20945 regulator of G-protein signaling 19 22679 RIKEN cDNA 1300019P08 gene 0.0 0.0 3.1 1.1 1.0 1.1
TATCATTTCG 14116 gamma-aminobutyric acid (GABA-A) receptor, subunit rho 1 0.0 0.0 3.1 1.1 1.0 1.1
ATTTTTGTAT 14145 M.musculus mRNA for Tcell receptor gamma chain 1843 heat shock protein, 86 kDa 1 7660 ESTs, Weakly similar to Bcl-2 binding component 3 [H.sapiens] 0.0 0.0 3.1 1.1 1.0 1.1
TTCTTAGTTT 15868 vesicle docking protein, 115 kDa 0.0 0.0 3.1 1.1 1.0 1.1
GAATATGGAA 27210 glucose-6-phosphate dehydrogenase X-linked 27213 ESTs, Highly  similar to TRANSCRIPTION INITIATION FACTOR IIB [Rattus norvegicus] 0.0 0.0 3.1 1.1 1.0 1.1
CGAGACCCTT 41892 RIKEN cDNA 5830457J20 gene 0.0 0.0 3.1 1.1 1.0 1.1
ACACCGAGGA 44673 ESTs 0.0 0.0 3.1 1.1 1.0 1.1
TCATTTGACT 63427 ESTs 0.0 0.0 3.1 1.1 1.0 1.1
ACCTTTTCAT 103495 RIKEN cDNA 5430405N12 gene 0.0 0.0 3.1 1.1 1.0 0.0
GGGACCTGGG 114880 ESTs 14774 TEA domain family member 4 24778 calpain 7 40034 ESTs 0.0 0.0 3.1 1.1 1.0 0.0
GCAGCCTGCG 1276 retinal S-antigen 0.0 0.0 3.1 1.1 1.0 0.0
CCAATCTTTG 1710 ESTs, Highly  similar to PORPHOBILINOGEN DEAMINASE [Mus musculus] 0.0 0.0 3.1 1.1 1.0 0.0
GCAGACACGA 21739 RIKEN cDNA 1190001E22 gene 0.0 0.0 3.1 1.1 1.0 0.0
CAGTTGAAGG 27902 ESTs 33649 ESTs, Weakly similar to AAKG MOUSE 5'-AMP-ACTIVATED PROTEIN KINASE, GAMMA-1 SUBUNIT [M.musculus] 0.0 0.0 3.1 1.1 1.0 0.0
TTTCAACTCC 29727 ESTs 0.0 0.0 3.1 1.1 1.0 0.0
CCAGATGCCC 30809 ESTs 7454 immunoglobulin (CD79A) binding protein 1 0.0 0.0 3.1 1.1 1.0 0.0
CTTCCATCCA 33830 RIKEN cDNA 4921523I18 gene 0.0 0.0 3.1 1.1 1.0 0.0
ATTTTATGTC 44641 ESTs 0.0 0.0 3.1 1.1 1.0 0.0
TTAAACCTGG 4653 transgene insert site 737, insertional mutation, polycystic kidney disease 0.0 0.0 3.1 1.1 1.0 0.0
AAATACCGCT 46702 ESTs 0.0 0.0 3.1 1.1 1.0 0.0
AATCAGTAAT 74311 RIKEN cDNA 2410089E03 gene 0.0 0.0 3.1 1.1 1.0 0.0
GGCTGAGCAC 0.0 0.0 3.1 1.1 1.0 0.0
GGACCTCATA 103575 cyclic nucleotide gated channel beta 3 135927 EST 0.0 0.0 3.1 1.1 0.0 2.1
GGTGTGAATG 21065 RIKEN cDNA 5730449L18 gene 0.0 0.0 3.1 1.1 0.0 2.1
AGTACCAAGG 24446 ESTs 0.0 0.0 3.1 1.1 0.0 2.1
CTTTCTCTTC 28765 RIKEN cDNA 1810049E02 gene 0.0 0.0 3.1 1.1 0.0 2.1
TCAACAACTG 29758 t-complex protein 11 0.0 0.0 3.1 1.1 0.0 2.1
GTGCTAGAAA 10414 myeloid leukemia factor 1 166064 ESTs 1948 t-complex testis expressed 1 297 melanoma X-actin 0.0 0.0 3.1 1.1 0.0 1.1
GCCGACGAGA 120657 ESTs 0.0 0.0 3.1 1.1 0.0 1.1
TTTGCCCCAG 22130 ribophorin II 23221 ESTs 0.0 0.0 3.1 1.1 0.0 1.1
TTCTGCCCAG 22830 crystallin, beta A1 0.0 0.0 3.1 1.1 0.0 1.1
TGAGACCCTG 27716 RIKEN cDNA 4932439K10 gene 0.0 0.0 3.1 1.1 0.0 1.1
CCATTTGATT 27796 hypothetical protein 0.0 0.0 3.1 1.1 0.0 1.1
AATAGACACG 28364 ESTs 0.0 0.0 3.1 1.1 0.0 1.1
ACTCCAAATA 32802 ESTs 0.0 0.0 3.1 1.1 0.0 1.1
CTAGAACTGT 68685 ESTs 0.0 0.0 3.1 1.1 0.0 1.1
GGACGATCAT 89146 RIKEN cDNA 6530415H11 gene 0.0 0.0 3.1 1.1 0.0 1.1
TCCCCAATAA 9239 RIKEN cDNA 2010302A17 gene 0.0 0.0 3.1 1.1 0.0 1.1
GCAGTCATCT 0.0 0.0 3.1 1.1 0.0 1.1
GTCTCTCACA 100287 RIKEN cDNA 4833422P03 gene 0.0 0.0 3.1 1.1 0.0 0.0
GTGCCAGAGT 103636 T-box 5 167633 ESTs 36685 RIKEN cDNA 3010001A07 gene 39204 ESTs 0.0 0.0 3.1 1.1 0.0 0.0
CAGTGGCACC 1215 crystallin, beta B2 0.0 0.0 3.1 1.1 0.0 0.0
ACTGTTACCT 149 RAD52 homolog, (S. cerevisiae) 0.0 0.0 3.1 1.1 0.0 0.0
TGAACACTGA 171784 ESTs 18843 transglutaminase 2, C polypeptide 0.0 0.0 3.1 1.1 0.0 0.0
TATTTTCCTT 18875 RIKEN cDNA 2010322C19 gene 0.0 0.0 3.1 1.1 0.0 0.0
GGAAAGTTCT 21693 RIKEN cDNA 2600016B03 gene 95622 EST 0.0 0.0 3.1 1.1 0.0 0.0
AGCATTCACA 23921 ESTs, Weakly similar to P1.11659 5 [H.sapiens] 0.0 0.0 3.1 1.1 0.0 0.0
CACCTGTATT 24186 bridging integrator 3 0.0 0.0 3.1 1.1 0.0 0.0
CTTGCTCCTC 24662 S100 calcium binding protein A1 0.0 0.0 3.1 1.1 0.0 0.0
AAATATATAT 27302 ESTs, Highly similar to KIAA0516 protein [H.sapiens] 0.0 0.0 3.1 1.1 0.0 0.0
TATTAGCCAA 28955 RIKEN cDNA 4930570C03 gene 0.0 0.0 3.1 1.1 0.0 0.0
TTACTTAGTG 29565 ESTs 0.0 0.0 3.1 1.1 0.0 0.0
ATCATCACAC 304 retinoblastoma 1 0.0 0.0 3.1 1.1 0.0 0.0
GACCACATTC 32002 ESTs, Weakly similar to G7A [M.musculus] 0.0 0.0 3.1 1.1 0.0 0.0
ATTTTGGAAT 33215 RIKEN cDNA C030044B11 gene 0.0 0.0 3.1 1.1 0.0 0.0
TGGCAGGTGT 34483 ESTs 0.0 0.0 3.1 1.1 0.0 0.0
GGAGAAGCTG 34602 ESTs 87283 RIKEN cDNA 2410127E18 gene 92529 ubiquilin 2 0.0 0.0 3.1 1.1 0.0 0.0
ACGCTATGGA 35867 cyclin E 2 0.0 0.0 3.1 1.1 0.0 0.0
GTCAGTGTCT 41602 RIKEN cDNA 3110050O07 gene 0.0 0.0 3.1 1.1 0.0 0.0
GTGGTATTAG 43213 RIKEN cDNA 9030402K04 gene 0.0 0.0 3.1 1.1 0.0 0.0
GGCAGAGAAG 44354 ESTs, Moderately similar to neurexin II-beta-b [R.norvegicus] 0.0 0.0 3.1 1.1 0.0 0.0
TAGCGAGTTG 44731 ESTs, Weakly similar to PRB1S precursor protein=basic proline-rich proteins [H.sapiens] 0.0 0.0 3.1 1.1 0.0 0.0
CTTGGTACTT 45783 ESTs 0.0 0.0 3.1 1.1 0.0 0.0
CTAGAGAAGT 46716 RIKEN cDNA 0610041G12 gene 0.0 0.0 3.1 1.1 0.0 0.0
CCCAGAGAAG 46772 ESTs 0.0 0.0 3.1 1.1 0.0 0.0
TCCTCGATGA 4787 G protein-coupled receptor 19 0.0 0.0 3.1 1.1 0.0 0.0
GAGGCCCCAA 53259 RIKEN cDNA 2700078K21 gene 0.0 0.0 3.1 1.1 0.0 0.0
TTAACTCTGA 86280 RIKEN cDNA 7330409J17 gene 0.0 0.0 3.1 1.1 0.0 0.0
AACGGTGTTT 86737 ESTs 0.0 0.0 3.1 1.1 0.0 0.0
CTGAGAGTCA 87525 RIKEN cDNA 6330410P18 gene 0.0 0.0 3.1 1.1 0.0 0.0
AGGCAAGCGG 0.0 0.0 3.1 1.1 0.0 0.0
GGCATTCCCG 0.0 0.0 3.1 1.1 0.0 0.0
TCACGTCACT 0.0 0.0 3.1 1.1 0.0 0.0
TCCCGCTGCT 0.0 0.0 3.1 1.1 0.0 0.0
TCGAAATAAT 0.0 0.0 3.1 1.1 0.0 0.0
CTGGGCTTGA 103583 DIPB gene 177171 ESTs 0.0 0.0 3.1 0.0 5.1 0.0
CCAGCCACAG 18561 cysteine and histidine-rich protein 0.0 0.0 3.1 0.0 4.1 2.1
CCCCAGGAGA 28337 RIKEN cDNA 4632432J16 gene 0.0 0.0 3.1 0.0 3.1 2.1
CCAAAAATGG 25634 RIKEN cDNA 2410018M14 gene 0.0 0.0 3.1 0.0 3.1 1.1
TTTTAATTGG 6765 seven in absentia 1A 0.0 0.0 3.1 0.0 3.1 1.1
CAGGGCAATT 107969 EST, Weakly similar to RAB geranylgeranyl transferase alpha subunit [M.musculus] 173815 ESTs 28770 RIKEN cDNA 1110002N23 gene 0.0 0.0 3.1 0.0 3.1 0.0
CTCCTACCTC 22045 ESTs, Moderately  similar to CYTOCHROME P450 IVF3 [Homo sapiens] 0.0 0.0 3.1 0.0 3.1 0.0
CACCAATATA 26500 ESTs, Highly similar to KIAA0417 [H.sapiens] 0.0 0.0 3.1 0.0 3.1 0.0
TCCTCTGGCG 35687 caspase 7 0.0 0.0 3.1 0.0 3.1 0.0
GTTGCCCGTG 38168 ESTs, Weakly similar to HYPOTHETICAL PROTEIN IN BDF1 5'REGION [Saccharomyces cerevisiae] 0.0 0.0 3.1 0.0 3.1 0.0
TCCCAGGGTC 4974 neural cell adhesion molecule 0.0 0.0 3.1 0.0 3.1 0.0
CTCCAGACAC 7124 RIKEN cDNA 2400004E04 gene 0.0 0.0 3.1 0.0 3.1 0.0
AACAAGCTCT 0.0 0.0 3.1 0.0 2.0 2.1
CTTGACTTTA 143830 alpha actinin 4 0.0 0.0 3.1 0.0 2.0 1.1
AAGCTTGACA 23118 RIKEN cDNA 1300008P06 gene 0.0 0.0 3.1 0.0 2.0 1.1
GAGCAGAAAA 32488 RIKEN cDNA 1110001C23 gene 0.0 0.0 3.1 0.0 2.0 1.1
TGTTTGTGCT 0.0 0.0 3.1 0.0 2.0 1.1
GTGTCTTCAC 17536 ESTs 0.0 0.0 3.1 0.0 2.0 0.0
CTGCAGTTTT 23809 RIKEN cDNA 0610006G17 gene 0.0 0.0 3.1 0.0 2.0 0.0
AGAATTTGGT 23816 ESTs 4551 villin 2 0.0 0.0 3.1 0.0 2.0 0.0
CTATCAGCCA 30489 ESTs, Weakly similar to KIAA0982 protein [H.sapiens] 0.0 0.0 3.1 0.0 2.0 0.0
CGGACTTCCA 34832 RIKEN cDNA 2410015L10 gene 0.0 0.0 3.1 0.0 2.0 0.0
GCACATTAAT 3879 hypoxia inducible factor 1, alpha subunit 0.0 0.0 3.1 0.0 2.0 0.0
ATTTAAGTAT 41716 ESTs 41939 RIKEN cDNA 1110018D06 gene 0.0 0.0 3.1 0.0 2.0 0.0
GCCTAACTCC 46438 RIKEN cDNA 1110007A10 gene 0.0 0.0 3.1 0.0 2.0 0.0
TTGTCTGTGT 54139 ESTs, Moderately similar to unnamed protein product [H.sapiens] 0.0 0.0 3.1 0.0 2.0 0.0
GATAGCACAC 89136 H3 histone, family 3A 0.0 0.0 3.1 0.0 2.0 0.0
CACGTAAGGC 0.0 0.0 3.1 0.0 2.0 0.0
GCTGGCCTCT 22979 ESTs 0.0 0.0 3.1 0.0 1.0 4.2
AGAACAGCAA 108982 ESTs 0.0 0.0 3.1 0.0 1.0 2.1
ATTCTCCCTG 147493 ESTs 0.0 0.0 3.1 0.0 1.0 1.1
AACTGGATCC 24586 RIKEN cDNA 2410019A14 gene 0.0 0.0 3.1 0.0 1.0 1.1
CCACTTTTGA 28422 ESTs, Moderately similar to autosomal highly conserved protein [H.sapiens] 0.0 0.0 3.1 0.0 1.0 1.1
AAATTATATG 28704 SEC23B (S. cerevisiae) 0.0 0.0 3.1 0.0 1.0 1.1
CGTGACTGGG 3259 nuclear transcription factor-Y beta 0.0 0.0 3.1 0.0 1.0 1.1
GTCCTCAGGG 48179 ESTs 0.0 0.0 3.1 0.0 1.0 1.1
ACCTGAAGTA 82666 ESTs, Weakly similar to cerebroside sulfotransferase [M.musculus] 86365 ESTs 0.0 0.0 3.1 0.0 1.0 1.1
TATTAATAGT 86277 ESTs 0.0 0.0 3.1 0.0 1.0 1.1
CACTGATTAA 0.0 0.0 3.1 0.0 1.0 1.1
TCCTGAACAG 104921 RIKEN cDNA 6530420C11 gene 27121 RIKEN cDNA 2610209N15 gene 0.0 0.0 3.1 0.0 1.0 0.0
AAAGCTACGA 12246 immediate early response 5 0.0 0.0 3.1 0.0 1.0 0.0
ATCTTGTGCC 12607 ESTs, Highly  similar to RHOMBOTIN-1 [Homo sapiens] 0.0 0.0 3.1 0.0 1.0 0.0
ACATTTTGGA 131379 ESTs 50233 ESTs 0.0 0.0 3.1 0.0 1.0 0.0
GGTAGAGCAG 133564 ESTs 20838 myotubularin related protein 1 0.0 0.0 3.1 0.0 1.0 0.0
CATATGATGA 142380 ribosomal protein L27a 150991 ESTs 0.0 0.0 3.1 0.0 1.0 0.0
TTCTCTGGAA 14272 defensin related cryptdin, related sequence 7 14733 defensin related cryptdin, related sequence 10 41902 ESTs, Weakly similar to CG12788 gene product [D.melanogaster] 0.0 0.0 3.1 0.0 1.0 0.0
ATGTTCGTGG 1791 RIKEN cDNA 1300019I03 gene 0.0 0.0 3.1 0.0 1.0 0.0
CCTACTCGGC 17964 etoile 0.0 0.0 3.1 0.0 1.0 0.0
CTCATTTCCT 18700 RIKEN cDNA 1200009K13 gene 0.0 0.0 3.1 0.0 1.0 0.0
GCGCTGTTTG 27834 RIKEN cDNA 2610202O07 gene 0.0 0.0 3.1 0.0 1.0 0.0
CCTGAGAGCT 28894 DNA segment, Chr 12, Wayne State University 118, expressed 0.0 0.0 3.1 0.0 1.0 0.0
AAAAGTGTGT 28931 ESTs 0.0 0.0 3.1 0.0 1.0 0.0
CAGCTATGTG 29017 RIKEN cDNA 4733401H14 gene 0.0 0.0 3.1 0.0 1.0 0.0
AAGCTAAAGG 29736 coilin 0.0 0.0 3.1 0.0 1.0 0.0
CAGCTTTGCT 32247 ESTs, Highly similar to SH3-containing protein p4015 [R.norvegicus] 0.0 0.0 3.1 0.0 1.0 0.0
AGGCTTTATG 33773 ESTs 0.0 0.0 3.1 0.0 1.0 0.0
CTGTTTTTAC 39131 ESTs 0.0 0.0 3.1 0.0 1.0 0.0
ACCATTTACT 41495 ESTs, Highly similar to AF155110 1 NY-REN-45 antigen [H.sapiens] 0.0 0.0 3.1 0.0 1.0 0.0
CATCTGTTAA 5286 acidic ribosomal phosphoprotein PO 0.0 0.0 3.1 0.0 1.0 0.0
ATCTCAGTAG 67919 v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) 0.0 0.0 3.1 0.0 1.0 0.0
CCCTGGACAT 7444 vesicular inhibitory amino acid transporter 0.0 0.0 3.1 0.0 1.0 0.0
AGGAGACTTG 0.0 0.0 3.1 0.0 1.0 0.0
GACAAGTATG 0.0 0.0 3.1 0.0 1.0 0.0
CAAGCATCAG 21954 RIKEN cDNA 2310050N11 gene 99729 ESTs 0.0 0.0 3.1 0.0 0.0 4.2
ATGAATTATG 27593 ESTs 0.0 0.0 3.1 0.0 0.0 2.1
ATCCTTTTTT 0.0 0.0 3.1 0.0 0.0 2.1
GTGTACATTC 100829 ESTs, Highly similar to T2D5 MOUSE TRANSCRIPTION INITIATION FACTOR TFIID 70 KD SUBUNIT [M.musculus] 0.0 0.0 3.1 0.0 0.0 1.1
TGTCTTTAAC 136985 RIKEN cDNA D230044M03 gene 38953 solute carrier family (organic anion transporter) member 13 0.0 0.0 3.1 0.0 0.0 1.1
CAACAACAAA 145100 Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830438A17, full insert sequence 0.0 0.0 3.1 0.0 0.0 1.1
GAAGGTAATT 154145 RIKEN cDNA 2310011F05 gene 180095 ethanol induced 1 0.0 0.0 3.1 0.0 0.0 1.1
AAGTTCTTAC 178424 RIKEN cDNA 2810047M21 gene 0.0 0.0 3.1 0.0 0.0 1.1
TGTTTAGTTC 181209 Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110076A12, full insert sequence 0.0 0.0 3.1 0.0 0.0 1.1
GATCCATTAG 18628 CD36 antigen 22374 glucosamine-6-phosphate deaminase 0.0 0.0 3.1 0.0 0.0 1.1
GACTGGAGAG 21353 ESTs, Highly similar to unnamed protein product [H.sapiens] 27523 RIKEN cDNA 1500031J01 gene 396 ubiquitin specific protease 9, X chromosome 0.0 0.0 3.1 0.0 0.0 1.1
TACTCACACA 24609 ESTs 0.0 0.0 3.1 0.0 0.0 1.1
GGCATATGAG 25593 ESTs 0.0 0.0 3.1 0.0 0.0 1.1
GATGTGTGGG 2627 X-ray repair complementing defective repair in Chinese hamster cells 5 0.0 0.0 3.1 0.0 0.0 1.1
AATGGCTGTT 30661 ESTs 0.0 0.0 3.1 0.0 0.0 1.1
TGCCTAATCT 38833 ESTs 0.0 0.0 3.1 0.0 0.0 1.1
CAAGGGCAAA 46040 ESTs 0.0 0.0 3.1 0.0 0.0 1.1
TGGAAAGTGA 5043 FBJ osteosarcoma oncogene 0.0 0.0 3.1 0.0 0.0 1.1
TTTCTCAATA 52748 RIKEN cDNA 1110017O10 gene 89698 ESTs 0.0 0.0 3.1 0.0 0.0 1.1
TTAGACAAAA 87704 RIKEN cDNA 6330407J23 gene 0.0 0.0 3.1 0.0 0.0 1.1
CAAAAGTTTA 95926 ESTs 0.0 0.0 3.1 0.0 0.0 1.1
GCGTATGTGT 0.0 0.0 3.1 0.0 0.0 1.1
GATTTCAAAA 10068 RIKEN cDNA 4432406C05 gene 42767 ribosomal protein S17 0.0 0.0 3.1 0.0 0.0 0.0
CTTTTCTCCT 102071 ESTs 154647 RIKEN cDNA 2700046G09 gene 0.0 0.0 3.1 0.0 0.0 0.0
AAAATGGAGA 105188 ESTs 2875 RIKEN cDNA 1100001J13 gene 33409 ESTs 38751 ESTs, Weakly similar to extracellular matrix protein [H.sapiens] 0.0 0.0 3.1 0.0 0.0 0.0
TTTACACCAA 10706 RIKEN cDNA 2010004J23 gene 0.0 0.0 3.1 0.0 0.0 0.0
ATTATGTGTT 139690 tropomodulin 1 0.0 0.0 3.1 0.0 0.0 0.0
CCTATGGACC 147510 ESTs 9239 RIKEN cDNA 2010302A17 gene 0.0 0.0 3.1 0.0 0.0 0.0
AACCACATAC 1485 ubiquitin-conjugating enzyme 4 0.0 0.0 3.1 0.0 0.0 0.0
ATCTTTCTTG 154906 RIKEN cDNA 2810003H13 gene 24642 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
TTTTGTCCCT 158102 ribosomal protein, mitochondrial, S24 159888 RIKEN cDNA 9430078K24 gene 7328 RIKEN cDNA 3110030K20 gene 0.0 0.0 3.1 0.0 0.0 0.0
TGATGGGTAC 15819 CD68 antigen 21126 ESTs, Weakly similar to CG7611 gene product [D.melanogaster] 0.0 0.0 3.1 0.0 0.0 0.0
GATTGAAGAG 158198 RIKEN cDNA 0610006A11 gene 22028 RIKEN cDNA 2500001N03 gene 0.0 0.0 3.1 0.0 0.0 0.0
AATGGTGGCA 159054 RIKEN cDNA 1110033L15 gene 778 RIKEN cDNA 2610107G07 gene 0.0 0.0 3.1 0.0 0.0 0.0
AAGATTCAGG 16773 serum albumin variant 87461 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
AGCTTCTCTT 1761 CDC-like kinase 0.0 0.0 3.1 0.0 0.0 0.0
TATTCAATCA 181892 RIKEN cDNA 5230400G24 gene 0.0 0.0 3.1 0.0 0.0 0.0
CCCATATGAA 19271 cysteine-rich motor neuron 1 0.0 0.0 3.1 0.0 0.0 0.0
CATTGAGAAG 20884 RAS, guanyl releasing protein 2 0.0 0.0 3.1 0.0 0.0 0.0
AGCAGCGAGG 21054 Y box protein 1 0.0 0.0 3.1 0.0 0.0 0.0
GTCCTCTTTC 21158 FK506 binding protein 12-rapamycin associated protein 1 0.0 0.0 3.1 0.0 0.0 0.0
TATAATTTGA 21915 RIKEN cDNA 2610318K02 gene 0.0 0.0 3.1 0.0 0.0 0.0
ACTTTAATAC 22270 ESTs, Moderately  similar to TUMOR-ASSOCIATED ANTIGEN CO-029 [Homo sapiens] 0.0 0.0 3.1 0.0 0.0 0.0
ATATCAAGAG 22755 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
TGCGTATTTA 25118 ESTs, Moderately similar to S55553 LAR-interacting protein LIP1b [H.sapiens] 0.0 0.0 3.1 0.0 0.0 0.0
ACAAGAGTGG 25136 N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase 30700 C-type lectin-like receptor 2 0.0 0.0 3.1 0.0 0.0 0.0
CTTCTGGAGA 26212 RIKEN cDNA 0610007L03 gene 27548 ESTs, Weakly similar to KIAA1458 protein [H.sapiens] 0.0 0.0 3.1 0.0 0.0 0.0
CGACAGGCAG 26898 DNA segment, Chr 9, Brigham & Women's Genetics 1371 expressed 0.0 0.0 3.1 0.0 0.0 0.0
GGGTTCAAAG 28099 sterol O-acyltransferase 1 4265 zinc finger protein of the cerebellum 3 0.0 0.0 3.1 0.0 0.0 0.0
AATAAACGTG 28867 tripeptidyl peptidase II 35807 RIKEN cDNA 2010004N24 gene 0.0 0.0 3.1 0.0 0.0 0.0
ATAACTGATC 28957 RIKEN cDNA 2810468L03 gene 0.0 0.0 3.1 0.0 0.0 0.0
TCTGCAGATG 29542 ESTs, Highly similar to U2R1 MOUSE U2 SMALL NUCLEAR RIBONUCLEOPROTEIN AUXILIARY FACTOR 35 KD SUBUNIT RELATED-PROTEIN 1 [M.musculus] 0.0 0.0 3.1 0.0 0.0 0.0
GACATTAGAT 29709 origin recognition complex, subunit 6 homolog (S. cerevisiae) 0.0 0.0 3.1 0.0 0.0 0.0
AAATTAATAC 30713 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
AGTGTTACCT 31186 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
TGTGTATCCT 3128 phosphatidylinositol transfer protein 56455 RIKEN cDNA 4933430F16 gene 0.0 0.0 3.1 0.0 0.0 0.0
TTTCTTTTCA 32357 ESTs, Moderately similar to unnamed protein product [H.sapiens] 3820 cytidine monophospho-N-acetylneuraminic acid synthetase 38200 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
AAGGTTTATC 3308 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide 34567 RIKEN cDNA 2410017I18 gene 0.0 0.0 3.1 0.0 0.0 0.0
CTGTCTGTAG 33437 RIKEN cDNA 6530416A09 gene 0.0 0.0 3.1 0.0 0.0 0.0
TGATTTCTTT 33490 ESTs 79541 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
CTCCATTATC 34525 ESTs, Moderately similar to AF190862 1 ADP-ribosylation factor binding protein GGA1 [H.sapiens] 0.0 0.0 3.1 0.0 0.0 0.0
CCATAAACAG 35061 DNA polymerase epsilon 0.0 0.0 3.1 0.0 0.0 0.0
TATTTTTCGT 39657 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
ATGAATACAT 40713 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
ATACTGTTTG 41156 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
GCAACCGAGA 41713 ESTs, Weakly similar to coded for by C. elegans cDNA yk20f8.5 [C.elegans] 0.0 0.0 3.1 0.0 0.0 0.0
CCTTGCTGAG 41791 glycoprotein m6b 967 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
TACCCGAGTA 45083 RIKEN cDNA 4930451G09 gene 0.0 0.0 3.1 0.0 0.0 0.0
GACAAAAGTA 45221 RIKEN cDNA 2810011M06 gene 0.0 0.0 3.1 0.0 0.0 0.0
AAGGAAAGGC 517 manic fringe homolog (Drosophila) 0.0 0.0 3.1 0.0 0.0 0.0
GGTCTGTGAG 54747 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
GTATTTATCG 56114 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
AAGCTGCTGT 566 origin recognition complex, subunit 5 homolog (S. cerevisiae) 0.0 0.0 3.1 0.0 0.0 0.0
TCTGCTCATA 67718 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
ACAGTCTGTT 6793 Harvey rat sarcoma virus oncogene 0.0 0.0 3.1 0.0 0.0 0.0
TGCGGTCACG 78025 RIKEN cDNA 2810055F11 gene 0.0 0.0 3.1 0.0 0.0 0.0
TATGAACAAA 91535 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
ACTTAGTCAT 91692 ESTs 0.0 0.0 3.1 0.0 0.0 0.0
GGCAAAGATA 97055 RIKEN cDNA 9130416N05 gene 0.0 0.0 3.1 0.0 0.0 0.0
AAATTTAACT 0.0 0.0 3.1 0.0 0.0 0.0
AACATATGGT 0.0 0.0 3.1 0.0 0.0 0.0
ACCTAGACCA 0.0 0.0 3.1 0.0 0.0 0.0
AGCATATGAT 0.0 0.0 3.1 0.0 0.0 0.0
AGTGACAGGG 0.0 0.0 3.1 0.0 0.0 0.0
ATGTGGCAAG 0.0 0.0 3.1 0.0 0.0 0.0
CCACCCAGGT 0.0 0.0 3.1 0.0 0.0 0.0
GCACTGTTGG 0.0 0.0 3.1 0.0 0.0 0.0
GCCAGAACCA 0.0 0.0 3.1 0.0 0.0 0.0
GCCCATTTTA 0.0 0.0 3.1 0.0 0.0 0.0
GCTGAGTGTG 0.0 0.0 3.1 0.0 0.0 0.0
GGCAAAGCCC 0.0 0.0 3.1 0.0 0.0 0.0
TAAAAGAGCT 0.0 0.0 3.1 0.0 0.0 0.0
AAACCCCACT 110329 ESTs 2965 rhodopsin 0.0 0.0 2.0 31.7 87.6 119.0
TAGATTTCCC 81416 RIKEN cDNA A930033N07 gene 0.0 0.0 2.0 19.0 20.4 14.7
TCTTTCAAGA 0.0 0.0 2.0 18.0 5.1 13.7
AAATCTCCAA 152952 ESTs 0.0 0.0 2.0 9.5 3.1 9.5
TTTCAGTTCG 0.0 0.0 2.0 9.5 0.0 0.0
GTACTTGGCT 39888 ESTs 0.0 0.0 2.0 7.4 3.1 3.2
CAGCTGTGTT 4181 Janus kinase 3 0.0 0.0 2.0 7.4 3.1 0.0
CACCCCCACA 173444 ESTs 42234 deoxyguanosine kinase 0.0 0.0 2.0 7.4 2.0 1.1
CACGGTGTGT 23793 cyclic nucleotide gated channel, cGMP gated 24550 ESTs 0.0 0.0 2.0 6.3 22.4 9.5
AACACACAGT 101118 Rab5 exchange factor 44821 ESTs 0.0 0.0 2.0 6.3 13.2 6.3
CCAAAGCCTT Pax6 0.0 0.0 2.0 6.3 6.1 3.2
CATCATTGGT 4919 DNA segment, human D4S114 0.0 0.0 2.0 6.3 1.0 1.1
CTGTGACAGA 179243 RIKEN cDNA 4930519N16 gene 0.0 0.0 2.0 5.3 4.1 4.2
ACCACAGACA 2756 high mobility group nucleosomal binding domain 1 30612 ESTs 0.0 0.0 2.0 5.3 4.1 3.2
TGATGCTAAC 24465 EST AI452337 0.0 0.0 2.0 5.3 2.0 0.0
ATAGGTTTCT 57138 sine oculis-related homeobox 6 homolog (Drosophila) 0.0 0.0 2.0 5.3 2.0 0.0
TTAATTGAAC 154662 procollagen, type IX, alpha 1 0.0 0.0 2.0 5.3 1.0 1.1
TAACCCCCAA 40194 double C2, gamma 0.0 0.0 2.0 5.3 1.0 1.1
CAATGTGCTG 90390 ESTs 0.0 0.0 2.0 5.3 1.0 1.1
ATACTTGCAG 0.0 0.0 2.0 5.3 0.0 2.1
TTTCTGTGAA 103771 regulator of G-protein signaling 20 34751 ESTs, Moderately similar to SFR8_HUMAN SPLICING FACTOR, ARGININE/SERINE-RICH 8 [H.sapiens] 0.0 0.0 2.0 4.2 4.1 1.1
CCACTCATCC 7213 Mus musculus gtf2ird2 mRNA, complete cds 0.0 0.0 2.0 4.2 3.1 1.1
CAGACTATAA 29308 ESTs, Highly similar to unnamed protein product [H.sapiens] 0.0 0.0 2.0 4.2 2.0 1.1
TCACAGGTGT 28287 Mus musculus, clone IMAGE:3494613, mRNA, partial cds 0.0 0.0 2.0 4.2 2.0 0.0
CCTAGGATAG 7686 RIKEN cDNA 1110005A03 gene 0.0 0.0 2.0 4.2 2.0 0.0
AGAAATAAAT 1571 RIKEN cDNA 2610005L07 gene 25695 ESTs 0.0 0.0 2.0 4.2 1.0 7.4
TTCGGACAAT 126068 ESTs 57158 cytoplasmic linker 2 0.0 0.0 2.0 4.2 1.0 1.1
TGCTGTAGCA 171298 RIKEN cDNA 2900045G12 gene 34036 potassium large conductance calcium-activated channel, subfamily M, beta member 4 0.0 0.0 2.0 4.2 1.0 1.1
GATTCAGCTG 22176 RIKEN cDNA 4930506L07 gene 0.0 0.0 2.0 4.2 1.0 1.1
CCTTTATTCC 32074 Mus musculus small conductance potassium channel mSK1 (SK1) mRNA, complete cds 169059 RIKEN cDNA 5730513I23 gene 35793 Sjogren syndrome antigen A2 3655 RAD54 like (S. cerevisiae) 0.0 0.0 2.0 4.2 1.0 1.1
CAACACCTTT 0.0 0.0 2.0 4.2 1.0 1.1
TTTGTAAAAA 41003 Mus musculus unknown protein mRNA, partial cds 25549 RIKEN cDNA 1700016A15 gene 0.0 0.0 2.0 4.2 1.0 0.0
ATGACAGCGA 2938 insulin-like growth factor 2 receptor 45812 ESTs 0.0 0.0 2.0 4.2 0.0 3.2
CGGATTTAGG 140568 RIKEN cDNA 1100001I22 gene 0.0 0.0 2.0 4.2 0.0 1.1
GCTATGCTAT 84028 ESTs 0.0 0.0 2.0 4.2 0.0 1.1
TTCAGTAATG 142352 RIKEN cDNA 1110067M05 gene 2020 cysteine-rich protein 2 23964 natural killer tumor recognition sequence 0.0 0.0 2.0 4.2 0.0 0.0
TGACTGCAAA 173258 ESTs 0.0 0.0 2.0 4.2 0.0 0.0
AATGCCATCT 27144 ESTs 0.0 0.0 2.0 4.2 0.0 0.0
TTAAATAATG 3879 hypoxia inducible factor 1, alpha subunit 0.0 0.0 2.0 4.2 0.0 0.0
CCCAACTCAA 27909 ESTs 0.0 0.0 2.0 3.2 8.1 6.3
TGATTGTGCT 21383 RIKEN cDNA 2810031L11 gene 0.0 0.0 2.0 3.2 6.1 4.2
TTGATCTTCA 0.0 0.0 2.0 3.2 5.1 7.4
GTGTTGAAGA 19825 RIKEN cDNA 1200015N20 gene 29815 ESTs, Highly  similar to S-ADENOSYLMETHIONINE SYNTHETASE GAMMA FORM [Rattus norvegicus] 0.0 0.0 2.0 3.2 3.1 8.4
GGCCTGAATT 180676 torsin family 2, member A 0.0 0.0 2.0 3.2 3.1 1.1
GAAATCCCAA 27232 RIKEN cDNA 5830462I21 gene 33798 ESTs 0.0 0.0 2.0 3.2 3.1 0.0
GCAAAAACAA 27809 ESTs, Highly similar to TTF-I interacting peptide 5 [H.sapiens] 0.0 0.0 2.0 3.2 3.1 0.0
ATAGCAGTTT 21099 ESTs 0.0 0.0 2.0 3.2 2.0 2.1
ATCTTGTGTG 22189 RIKEN cDNA 2810008P14 gene 24370 ESTs 0.0 0.0 2.0 3.2 2.0 1.1
GACACCTGAA 143826 transmembrane protein 6 0.0 0.0 2.0 3.2 2.0 0.0
CCCGCACCCG 178549 RIKEN cDNA 3110018A08 gene 0.0 0.0 2.0 3.2 2.0 0.0
AGAGGGTGAG 101927 ESTs 0.0 0.0 2.0 3.2 1.0 3.2
TTGCCTCACT 28544 RIKEN cDNA 1600012H06 gene 0.0 0.0 2.0 3.2 1.0 2.1
ACACAAAGCT 156202 EST 0.0 0.0 2.0 3.2 1.0 1.1
TGTGTTTGTG 20847 RIKEN cDNA 1810032P22 gene 33185 ESTs, Weakly similar to DPP4 MOUSE DIPEPTIDYL PEPTIDASE IV [M.musculus] 99397 RIKEN cDNA 4930558E03 gene 0.0 0.0 2.0 3.2 1.0 1.1
CTGGCCAGGA 34298 RIKEN cDNA 1300018I05 gene 0.0 0.0 2.0 3.2 1.0 1.1
ACCTAGCCAC 100108 RIKEN cDNA 5730414M22 gene 7281 procollagen, type V, alpha 1 0.0 0.0 2.0 3.2 1.0 0.0
TGATGCCAAT 1323 U2 small nuclear ribonucleoprotein B 0.0 0.0 2.0 3.2 1.0 0.0
GGACATCTCA 14569 ESTs, Highly similar to AF208858 1 BM-016 [H.sapiens] 31597 ESTs 0.0 0.0 2.0 3.2 1.0 0.0
AGTTCACAGA 156895 RIKEN cDNA 1110020E07 gene 0.0 0.0 2.0 3.2 1.0 0.0
TGAAATGGCC 28020 RIKEN cDNA 3000002A17 gene 0.0 0.0 2.0 3.2 1.0 0.0
GCACCTCTTA 29624 intracisternal A particles 0.0 0.0 2.0 3.2 1.0 0.0
CCGACTCTTT 41657 RIKEN cDNA 3110069K09 gene 50983 EST 0.0 0.0 2.0 3.2 1.0 0.0
GAGACCACGT 0.0 0.0 2.0 3.2 1.0 0.0
GTGAGACCTC 167734 ESTs 21171 RIKEN cDNA 1110033O09 gene 0.0 0.0 2.0 3.2 0.0 3.2
GCCCGCGGTG 23943 vesicle-associated membrane protein, associated protein A (33 kDa) 0.0 0.0 2.0 3.2 0.0 2.1
TGGAGGGCAC 128684 ESTs 0.0 0.0 2.0 3.2 0.0 1.1
GATAATTTCT 141945 transcription elongation factor A (SII) 1 0.0 0.0 2.0 3.2 0.0 1.1
AATGTATTAT 39751 RIKEN cDNA 2310036I02 gene 0.0 0.0 2.0 3.2 0.0 1.1
GAACTTTAGG 40789 ESTs 0.0 0.0 2.0 3.2 0.0 1.1
TTGGGTTTCA 4300 cyclin C 0.0 0.0 2.0 3.2 0.0 1.1
GAAGATGCAC 0.0 0.0 2.0 3.2 0.0 1.1
TGTGGTGGGA 0.0 0.0 2.0 3.2 0.0 1.1
TGAAGAATAC 167403 EST 62136 ESTs 0.0 0.0 2.0 3.2 0.0 0.0
ACGGGTCTGT 26181 ESTs 0.0 0.0 2.0 3.2 0.0 0.0
AGCTTTTTCT 26583 ESTs, Highly similar to NIK [M.musculus] 0.0 0.0 2.0 3.2 0.0 0.0
CAGGAGCTCT 46189 DNA segment, Chr 11, KL Mohlke 48 0.0 0.0 2.0 3.2 0.0 0.0
GCGGGGGGCG 0.0 0.0 2.0 3.2 0.0 0.0
GGGGGCTCAC 0.0 0.0 2.0 2.1 5.1 6.3
GTGCGTGGGT 141563 RIKEN cDNA 1300017E19 gene 0.0 0.0 2.0 2.1 4.1 0.0
GGAGACTCTG 34501 ESTs 0.0 0.0 2.0 2.1 4.1 0.0
TCTTTGTGGG 139683 ESTs 0.0 0.0 2.0 2.1 3.1 6.3
AAGATGTGCT 27796 hypothetical protein 29581 hairy/enhancer-of-split related with YRPW motif 1 0.0 0.0 2.0 2.1 3.1 3.2
ATGCTAGAGG 34779 ubiquitously expressed transcript 0.0 0.0 2.0 2.1 3.1 3.2
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