Table S2. SAGE tag levels for nonretinal, P10.5, adult retina, and ONL libraries
This lists a full breakdown of all SAGE tags from the following libraries: 3T3 cells, hypothalamus, P10.5 crx-/-, P10.5 crx+/+, adult whole retina and adult microdissected outer nuclear layer (ONL).  Tag totals are normalized to 55,000.  The Gene field contains the mouse Unigene number assignment for the tag followed by the gene name.  Tags with multiple predicted identities are listed together in the Gene column.
Tag Gene 3t3 hypothalamus P10.5 crx-/- P10.5 crx+/+ adult retina ONL
GGGAGAGATA 35661 ESTs, Moderately similar to unnamed protein product [H.sapiens] 0.0 8.0 16.3 13.7 8.1 7.4
GGGGCCTCTG 182950 RIKEN cDNA 5330437I08 gene 34388 RIKEN cDNA 1110001K21 gene 0.0 8.0 15.3 12.7 8.1 2.1
AGGCCACAGC 0.0 8.0 15.3 1.1 0.0 0.0
ACCCTGCTGT 24374 DNA segment, Chr 10, Brigham & Women's Genetics 0629 expressed 0.0 8.0 11.2 4.2 8.1 0.0
GCCTGTGGTG 22154 lymphocyte antigen 6 complex, locus H 0.0 8.0 11.2 2.1 0.0 1.1
CACACTCGAA 43397 RIKEN cDNA 0610008M19 gene 0.0 8.0 9.2 7.4 5.1 7.4
TAACTGGAGG 22831 ESTs, Weakly similar to DRPL RAT ATROPHIN-1 [R.norvegicus] 0.0 8.0 8.2 9.5 19.3 3.2
TGGGGTCTCA 1538 basic transcription factor 3 0.0 8.0 8.2 5.3 1.0 2.1
GGAGAACCTT 142140 neurofilament, medium polypeptide 0.0 8.0 7.2 18.0 2.0 1.1
CAGTTATTGT 4651 kinesin-associated protein 3 0.0 8.0 7.2 8.5 3.1 2.1
TATGTCAGTA 180763 RIKEN cDNA 2310004O14 gene 29972 RIKEN cDNA 1300019I11 gene 0.0 8.0 6.1 5.3 3.1 3.2
CTGGGTCTCC 41323 ESTs 0.0 8.0 6.1 3.2 3.1 2.1
TGCCCAGTGC 41602 RIKEN cDNA 3110050O07 gene 0.0 8.0 5.1 8.5 3.1 0.0
AAGAGAAAGA 173649 ESTs 28356 vacuolar protein sorting 29 (S. pombe) 0.0 8.0 5.1 7.4 3.1 7.4
GATTTGCACT 4550 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0 8.0 5.1 5.3 1.0 2.1
AGAGAGAGAG 9277 phospholipase A2 group VII (platelet-activating factor acetylhydrolase, plasma) 0.0 8.0 5.1 3.2 5.1 4.2
GAATTGATGA 41583 ESTs, Moderately similar to PTD015 [H.sapiens] 5038 secretogranin II 0.0 8.0 5.1 2.1 9.2 0.0
CAGTTATTAA 41190 RIKEN cDNA 1700112L09 gene 4266 integral membrane protein 2 B 0.0 8.0 5.1 2.1 1.0 0.0
TGGACGATTT 35754 ESTs 0.0 8.0 4.1 8.5 7.1 2.1
TGATGACCGA 158240 RIKEN cDNA 1810022E02 gene 182715 RIKEN cDNA 2700094G22 gene 29372 RIKEN cDNA 0610039D01 gene 0.0 8.0 4.1 7.4 5.1 3.2
GATTGTCTTG 28480 FK506-binding protein 3 (25kD) 0.0 8.0 4.1 6.3 2.0 4.2
TACACTGCTT 41438 RIKEN cDNA 2310012M18 gene 0.0 8.0 4.1 5.3 3.1 2.1
GAGTCTGTTA 4465 f-box and WD-40 domain protein 2 0.0 8.0 4.1 4.2 0.0 3.2
CTGAAAAAAA 45225 RIKEN cDNA 2510005D08 gene 0.0 8.0 4.1 3.2 4.1 2.1
GCTTAAGTGT 21251 deleted in polyposis 1 0.0 8.0 4.1 3.2 4.1 0.0
TGACCTGGCA 40574 DNA segment, Chr 6, ERATO Doi 349, expressed 0.0 8.0 4.1 2.1 3.1 1.1
TAACTTAAGC 22145 RIKEN cDNA 2310076K21 gene 0.0 8.0 4.1 2.1 2.0 7.4
GGGCCCAGGC 11030 RIKEN cDNA 3110032M18 gene 24142 reticulon 2 (Z-band associated protein) 0.0 8.0 3.1 7.4 12.2 6.3
TAACAGGATA 27240 RIKEN cDNA 2610510D14 gene 0.0 8.0 3.1 6.3 4.1 2.1
CTAATAAACG 29122 RIKEN cDNA 0610012D09 gene 0.0 8.0 3.1 4.2 2.0 3.2
AGATCGTATG 27579 RIKEN cDNA 2900062L11 gene 6402 telomeric repeat binding factor 2 0.0 8.0 3.1 3.2 3.1 2.1
GGGCCCTGTA 25116 ESTs 0.0 8.0 3.1 3.2 2.0 1.1
TACATTGTAA 121714 ESTs 41605 RIKEN cDNA 1100001D19 gene 0.0 8.0 3.1 1.1 2.0 0.0
GGAAGAGGAA 180516 ESTs 38248 sialyltransferase 9 (CMP-NeuAc:lactosylceramide alpha-2,3-sialyltransferase) 0.0 8.0 3.1 0.0 5.1 1.1
GGAAAAAAAA 11703 ESTs 0.0 8.0 2.0 8.5 3.1 9.5
TACCATTTAA 85137 ESTs 0.0 8.0 2.0 6.3 2.0 0.0
AGAGCAAGGA 23437 EST AI448550 0.0 8.0 2.0 5.3 2.0 0.0
TTGACCGTAA 9934 ESTs 0.0 8.0 2.0 4.2 2.0 3.2
GCCTGTGTAT 31075 ESTs 0.0 8.0 2.0 4.2 0.0 3.2
TGACTTTTCT 12236 zinc finger protein 207 0.0 8.0 2.0 3.2 2.0 2.1
ATGAAACTTT 23249 ESTs 0.0 8.0 2.0 2.1 3.1 4.2
TTAAATGCAA 10153 twisted gastrulation protein 34258 ESTs 0.0 8.0 2.0 0.0 1.0 1.1
TGACATTGTC 31395 carboxypeptidase E 0.0 8.0 1.0 6.3 2.0 5.3
CAGGTTGGTT 46513 RIKEN cDNA 2610200G18 gene 0.0 8.0 1.0 4.2 4.1 0.0
GCGTTGAGAT 44984 ESTs 0.0 8.0 1.0 4.2 3.1 0.0
CATCTTTATG 7884 RIKEN cDNA 1810010A06 gene 0.0 8.0 1.0 4.2 0.0 1.1
CTGTAGAGTG 0.0 8.0 1.0 4.2 0.0 0.0
GTGGTTGAAA 116885 ESTs 22729 RIKEN cDNA 1110060O10 gene 0.0 8.0 1.0 2.1 2.0 0.0
AAAAATAAAA 27742 ESTs 293 protein phosphatase 3, catalytic subunit, alpha isoform 45151 RIKEN cDNA 1700043E15 gene 0.0 8.0 1.0 2.1 1.0 0.0
TAACAGGAAA 20852 erythrocyte protein band 4.1-like 1 0.0 8.0 1.0 2.1 0.0 1.1
ATCTCAAACC 30240 RIKEN cDNA 1110047B07 gene 0.0 8.0 1.0 2.1 0.0 0.0
ATCTTTATAA mito Tag matches mitochondrial sequence 0.0 8.0 1.0 1.1 0.0 1.1
AATATTATCT 34180 ESTs 0.0 8.0 1.0 0.0 3.1 1.1
GCATAAGCAA 15571 amyloid beta (A4) precursor protein 0.0 8.0 1.0 0.0 1.0 0.0
TTTGTTATAG 44226 RIKEN cDNA 3010027G13 gene 0.0 8.0 1.0 0.0 1.0 0.0
TACTACAGCT 23304 transmembrane protein with EGF-like and two follistatin-like domains 2 0.0 8.0 1.0 0.0 0.0 0.0
GAAACCTCTA 32334 ESTs 0.0 8.0 1.0 0.0 0.0 0.0
GAGAAATATA 43017 RIKEN cDNA 0610040D20 gene 0.0 8.0 0.0 4.2 1.0 3.2
TGCTTTTACG 39473 dimerization cofactor of hepatocyte nuclear factor-1-alpha 0.0 8.0 0.0 3.2 1.0 0.0
ATGAAATGTT 0.0 8.0 0.0 2.1 4.1 0.0
TGATATAACG 27359 ESTs 0.0 8.0 0.0 2.1 2.0 5.3
TGGCATACTC 45203 ESTs 0.0 8.0 0.0 2.1 0.0 0.0
CATCTTTAAA 7884 RIKEN cDNA 1810010A06 gene 0.0 8.0 0.0 1.1 2.0 0.0
TGCGTATGTG 0.0 8.0 0.0 1.1 1.0 0.0
TTGTTTGTAA 2655 quaking 0.0 8.0 0.0 1.1 0.0 0.0
CTCTGCAATC 31751 ESTs, Moderately similar to G protein-coupled receptor [R.norvegicus] 0.0 8.0 0.0 0.0 2.0 0.0
GACTTGGATT 0.0 8.0 0.0 0.0 1.0 0.0
TTCGGTCCTC 0.0 8.0 0.0 0.0 1.0 0.0
AAGGAGTTAC 13886 suppressor of initiator codon mutations, related sequence 1 (S. cerevisiae) 0.0 8.0 0.0 0.0 0.0 0.0
TGACCTTCCT 34632 succinate-Coenzyme A ligase, GDP-forming, beta subunit 0.0 8.0 0.0 0.0 0.0 0.0
GCCTCAGAGT 35439 secreted acidic cysteine rich glycoprotein 0.0 8.0 0.0 0.0 0.0 0.0
AAATCTCCTG 0.0 8.0 0.0 0.0 0.0 0.0
TCCTTTTAGC 0.0 8.0 0.0 0.0 0.0 0.0
ACTGCCTGCT 41630 RIKEN cDNA 0710001E10 gene 0.0 7.0 19.4 14.8 5.1 4.2
ACCACTGATA 30069 RIKEN cDNA 1200003J11 gene 0.0 7.0 17.4 29.6 9.2 23.2
TGCTTGGAAA 21932 RIKEN cDNA 2700060E02 gene 5089 sal-like 3 (Drosophila) 0.0 7.0 16.3 10.6 1.0 6.3
GAACCAGTTA 29362 ESTs 0.0 7.0 15.3 24.3 14.3 3.2
GGGTTTTTAT 21054 Y box protein 1 0.0 7.0 14.3 10.6 4.1 8.4
GGAGTTGTGC 18939 phosphomannomutase 1 0.0 7.0 13.3 11.6 6.1 2.1
GCCCCCCTCT 44101 ESTs, Weakly similar to 2112199B H/K ATPase:SUBUNIT=alpha [M.musculus] 0.0 7.0 12.3 15.9 29.5 16.9
TAAAAGAAAA 18249 RIKEN cDNA 2610027H02 gene 0.0 7.0 11.2 7.4 2.0 11.6
CCATTGATCA 23693 RIKEN cDNA 2010320M17 gene 0.0 7.0 11.2 4.2 3.1 6.3
GAAATGCTGC 157511 solute carrier family 20, member 2 5409 ESTs 0.0 7.0 8.2 8.5 8.1 2.1
AAATAAAGTC 30145 Mus musculus putative nucleotide pyrophosphatase/phosphodiesterase mRNA, complete cds 0.0 7.0 8.2 8.5 2.0 0.0
ATGGGGTTGG 139239 RIKEN cDNA 2900016C05 gene 29529 ESTs 34766 RIKEN cDNA 1700105P06 gene 0.0 7.0 8.2 7.4 13.2 5.3
GAGGTTAACC 140841 DNA segment, Chr 12, ERATO Doi 549, expressed 0.0 7.0 8.2 5.3 1.0 3.2
TAAGATGCTG 24183 neuronal protein 0.0 7.0 8.2 2.1 3.1 2.1
GTTGTCTTTG 160158 RIKEN cDNA 9430068D06 gene 21714 RIKEN cDNA 2410003A14 gene 0.0 7.0 7.2 9.5 7.1 4.2
ACCCGGCTAG 2214 septin 4 0.0 7.0 7.2 7.4 7.1 3.2
AACTTAAAAA 21740 heterogeneous nuclear ribonucleoprotein H1 41388 ESTs 0.0 7.0 7.2 4.2 2.0 0.0
TTTATATAAA 12481 centrin 3 0.0 7.0 7.2 2.1 0.0 7.4
TTAATAAAAT 10076 RIKEN cDNA 1110002D09 gene 127866 ESTs, Moderately similar to AF257305 1 ASH1 [H.sapiens] 27796 hypothetical protein 0.0 7.0 7.2 2.1 0.0 1.1
CATTTGAAAA 153167 mitogen activated protein kinase kinase 2 0.0 7.0 7.2 0.0 4.1 3.2
TTGGTAATCT 19097 pleckstrin homology, Sec7 and coiled/coil domains 2 0.0 7.0 6.1 7.4 4.1 14.7
TCAGGAAACA 158401 RIKEN cDNA 5730419F03 gene 1706 ESTs, Moderately  similar to EUKARYOTIC INITIATION FACTOR 4A [Caenorhabditis elegans] 0.0 7.0 6.1 6.3 4.1 8.4
GGGCACAACT 4137 chromogranin A 0.0 7.0 5.1 13.7 6.1 0.0
AAACCCTTAA 14534 RIKEN cDNA 9130221H12 gene 0.0 7.0 5.1 6.3 1.0 4.2
TAAGATTTCA 31051 ESTs, Highly similar to T02673 heterogeneous nuclear ribonucleoprotein R [H.sapiens] 0.0 7.0 5.1 6.3 0.0 9.5
TAATTTTTTT 117055 RIKEN cDNA 4432412D15 gene 16453 peroxisomal membrane protein 3, 35 kDa 22675 pre B-cell leukemia transcription factor 1 0.0 7.0 5.1 3.2 1.0 2.1
CAAATACCCA 42197 Mus musculus proteasome beta-subunit C5 (Psmb1) mRNA, partial cds 163414 ESTs 0.0 7.0 5.1 3.2 1.0 1.1
TTTTTCAATC 32545 ESTs 0.0 7.0 4.1 14.8 4.1 12.6
AAGAAAAAGT 183102 RIKEN cDNA 1200003A09 gene 0.0 7.0 4.1 7.4 0.0 8.4
GCTTTTGTTA 41248 ESTs 0.0 7.0 4.1 4.2 2.0 2.1
AAAATGCCTT 20461 gamma-glutamyl hydrolase 32584 RIKEN cDNA 4921501M20 gene 0.0 7.0 4.1 3.2 3.1 5.3
GCTTGACCTT 1187 ESTs 0.0 7.0 4.1 3.2 3.1 0.0
TTTTGCTATG 21645 RIKEN cDNA 1110011I19 gene 0.0 7.0 4.1 2.1 1.0 4.2
GGGAGTGGGG 46628 vascular endothelial zinc finger 1 0.0 7.0 4.1 2.1 1.0 2.1
AATAGTTTGA 43278 olfactomedin related ER localized protein 0.0 7.0 4.1 0.0 0.0 0.0
ATTTAAACAG 19027 molybdenum cofactor synthesis 2 0.0 7.0 3.1 7.4 3.1 2.1
TCCTTCCTTC 41779 RIKEN cDNA 3110017O03 gene 0.0 7.0 3.1 5.3 0.0 0.0
TGGTTAAAAG 31979 RIKEN cDNA 2600006O07 gene 0.0 7.0 3.1 3.2 3.1 1.1
GTGCCATATT 2966 isocitrate dehydrogenase 2 (NADP+), mitochondrial 0.0 7.0 3.1 3.2 1.0 0.0
TCACTATAGC 29717 3-monooxgenase/tryptophan 5-monooxgenase activation protein, gamma polypeptide 0.0 7.0 3.1 2.1 0.0 0.0
TAAAATAAAA 158682 RIKEN cDNA 5430438D01 gene 158921 RIKEN cDNA 2900057C01 gene 18921 valosin containing protein 24086 RIKEN cDNA 3930401E15 gene 3317 beta-glucuronidase structural 4736 retinoic acid induced 1 0.0 7.0 3.1 1.1 0.0 4.2
TAAGAGCTAT 28944 RIKEN cDNA 1500031D15 gene 0.0 7.0 3.1 0.0 4.1 2.1
AAGACATCTG 27047 ESTs 0.0 7.0 3.1 0.0 3.1 0.0
TGAACTGTTA 22470 RIKEN cDNA 1110030M22 gene 0.0 7.0 3.1 0.0 1.0 0.0
TTAACTCTGT 23939 ESTs 0.0 7.0 2.0 6.3 3.1 2.1
CCCTCCCCAC 23997 RPB5-mediating protein 41840 protein phospatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) 0.0 7.0 2.0 6.3 2.0 2.1
ACTAAACCAT 3466 activating transcription factor 2 0.0 7.0 2.0 5.3 2.0 2.1
AATAAACTGC 86962 ESTs 0.0 7.0 2.0 5.3 0.0 1.1
TAATAAATGA 24848 RIKEN cDNA 1110020I04 gene 0.0 7.0 2.0 3.2 3.1 2.1
TACACACTGG 158108 RIKEN cDNA 1110066L09 gene 34586 RIKEN cDNA 1810064C02 gene 0.0 7.0 2.0 3.2 2.0 1.1
TAGGAACCCT mito Tag matches mitochondrial sequence 0.0 7.0 2.0 3.2 2.0 1.1
TGTGGTTCCA 0.0 7.0 2.0 3.2 1.0 0.0
TTGTTTTCCT 14286 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF), 35 kDa, related sequence 1 28913 RIKEN cDNA 2610315E15 gene 33889 ESTs 0.0 7.0 2.0 2.1 5.1 3.2
TGAAATAAAA 102093 hypothetical protein MGC7623 27088 ESTs 0.0 7.0 2.0 2.1 1.0 2.1
GATCTGACCC 110270 RIKEN cDNA B230217C12 gene 0.0 7.0 2.0 2.1 1.0 0.0
TGCATTGCTG 45975 ESTs 0.0 7.0 2.0 1.1 6.1 1.1
TGAAATGTGC 101465 ESTs 40366 ESTs 0.0 7.0 2.0 1.1 2.0 0.0
TGTTTTTTGT 1296 testis specific gene 1 148768 ESTs 154186 DNA segment, Chr 16, Wayne State University 83, expressed 4435 synaptosomal-associated protein, 25 kDa 0.0 7.0 2.0 1.1 1.0 1.1
ACACCAGTAC 0.0 7.0 2.0 0.0 0.0 1.1
GGAAGATGAA 28219 DNA segment, Chr 7, Brigham & Women's Genetics  0575 expressed 0.0 7.0 1.0 5.3 7.1 3.2
ATAACAAAAT 154145 RIKEN cDNA 2310011F05 gene 180095 ethanol induced 1 0.0 7.0 1.0 4.2 3.1 1.1
TGGTCAGGAT 0.0 7.0 1.0 3.2 2.0 1.1
GTACTTTTTC 162904 ESTs 30212 ESTs, Weakly similar to SPORULATION-SPECIFIC PROTEIN 1 [Saccharomyces cerevisiae] 34330 bladder cancer associated protein homolog (human) 0.0 7.0 1.0 3.2 2.0 0.0
CTACCCCTGG 143788 protein phosphatase 1, regulatory (inhibitor) subunit 1A 31199 RIKEN cDNA 2900075A18 gene 0.0 7.0 1.0 2.1 5.1 0.0
ATGTCAAAAT 55843 RIKEN cDNA 0610025N14 gene 0.0 7.0 1.0 2.1 1.0 1.1
TTTATTAAAT 40989 hyaluronic acid-binding protein 4 0.0 7.0 1.0 1.1 1.0 3.2
TTGATTAGCA 0.0 7.0 1.0 1.1 0.0 6.3
GCTAAAGACC 29911 RIKEN cDNA 3200001M24 gene 0.0 7.0 1.0 1.1 0.0 0.0
GCCTCACATC mito Tag matches mitochondrial sequence 0.0 7.0 1.0 0.0 2.0 4.2
TCGGCCGGGG 182042 RIKEN cDNA 0610009D10 gene 0.0 7.0 1.0 0.0 2.0 0.0
TGCCATAGAA 1239 glial fibrillary acidic protein 0.0 7.0 1.0 0.0 1.0 0.0
AAGGGCAAAA 166849 ESTs 34856 ESTs, Weakly similar to AF107204 1 ataxin 2-binding protein [M.musculus] 0.0 7.0 1.0 0.0 1.0 0.0
TAGCTTGTTT 22753 cathepsin B 0.0 7.0 1.0 0.0 0.0 3.2
GTGCTGCGTC 27760 RIKEN cDNA 1500003P24 gene 0.0 7.0 1.0 0.0 0.0 0.0
GAGCACATAG 0.0 7.0 1.0 0.0 0.0 0.0
GTATTGGCCT 5885 RIKEN cDNA 1500001N15 gene 0.0 7.0 0.0 2.1 5.1 1.1
ACAAAGTGTC 153783 pantophysin 0.0 7.0 0.0 2.1 5.1 0.0
GTGGCCTCAC 0.0 7.0 0.0 2.1 3.1 2.1
TATGAAAAAA 464 RIKEN cDNA 4921531G14 gene 0.0 7.0 0.0 2.1 2.0 5.3
GAAATAAACA 3395 RIKEN cDNA 1110003B01 gene 0.0 7.0 0.0 2.1 1.0 1.1
TTTAACTGAA 28092 RIKEN cDNA 0610009E20 gene 0.0 7.0 0.0 2.1 0.0 3.2
GAAGAATAAT 153748 RIKEN cDNA 5031422I09 gene 21146 GATA-binding protein 6 34326 RIKEN cDNA 5730415P04 gene 0.0 7.0 0.0 2.1 0.0 1.1
TTGCTCTTCA 32310 ESTs 0.0 7.0 0.0 2.1 0.0 1.1
GAAAACTTAA 106607 ESTs 142380 ribosomal protein L27a 4591 tubulin alpha 2 0.0 7.0 0.0 2.1 0.0 0.0
ATGGTCAAGG 36850 smoothelin 0.0 7.0 0.0 1.1 0.0 0.0
TGGGGTTGGG 0.0 7.0 0.0 0.0 1.0 5.3
GCTTTCTTCC 915 interleukin 2 receptor, alpha chain 0.0 7.0 0.0 0.0 1.0 1.1
AGCATCAATA 138583 ESTs, Moderately similar to TAFII250 transcription factor [M.musculus] 22116 ESTs 40863 ESTs 0.0 7.0 0.0 0.0 1.0 0.0
GAGGAGGTGC 138866 apolipoprotein E 0.0 7.0 0.0 0.0 1.0 0.0
TCTCAGCAAA 57070 patched homolog 0.0 7.0 0.0 0.0 1.0 0.0
GTATATATAT 0.0 7.0 0.0 0.0 0.0 1.1
TTGATAATAG 0.0 7.0 0.0 0.0 0.0 1.1
GGGTACCAGG 22021 RIKEN cDNA 2410006F12 gene 0.0 7.0 0.0 0.0 0.0 0.0
TGAGATTTTT 80 alpha fetoprotein 0.0 7.0 0.0 0.0 0.0 0.0
ACAAAAAATT 0.0 7.0 0.0 0.0 0.0 0.0
GCCCTCCCAC 0.0 7.0 0.0 0.0 0.0 0.0
TGACTAGCGT 1339 chromogranin B 0.0 6.0 71.5 20.1 15.3 4.2
GGAAAAATAG 1956 neurofilament, light polypeptide 27805 RIKEN cDNA 1700124F02 gene 40678 phosphodiesterase 1A, calmodulin-dependent 0.0 6.0 16.3 10.6 2.0 1.1
TTACAGCAGA 21915 RIKEN cDNA 2610318K02 gene 0.0 6.0 14.3 5.3 6.1 4.2
ACATACAAAT 19039 glutamate oxaloacetate transaminase 1, soluble 0.0 6.0 14.3 2.1 4.1 4.2
GAGCTGTAAT 28000 RIKEN cDNA 2210415J11 gene 0.0 6.0 13.3 6.3 4.1 4.2
TTTTCTGCAT 56337 platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit 0.0 6.0 13.3 6.3 2.0 4.2
GTACAATACA 29264 RIKEN cDNA 1110008F13 gene 0.0 6.0 13.3 4.2 2.0 5.3
ACTAACTGTG 12145 retinoblastoma binding protein 4 0.0 6.0 12.3 14.8 4.1 6.3
TGTTGTACCT 23531 ESTs 0.0 6.0 12.3 14.8 4.1 2.1
AGGGAAAAAA 182860 ESTs 3655 RAD54 like (S. cerevisiae) 0.0 6.0 11.2 28.5 29.5 56.9
GAGCGGGATC 6840 RIKEN cDNA 5730507C05 gene 0.0 6.0 11.2 14.8 10.2 3.2
GATTTTATTT 29089 poly(rC)-binding protein 1 0.0 6.0 10.2 3.2 2.0 5.3
AAGGTTGACT 9488 CDC like kinase 4 0.0 6.0 9.2 9.5 7.1 2.1
GAACCCTGAG 460 suppressor of Ty 5 homolog (S. cerevisiae) 0.0 6.0 9.2 2.1 7.1 9.5
GTGGCTCCCA 0.0 6.0 8.2 6.3 8.1 15.8
ACAAAGGTTA 29187 LIM only 4 0.0 6.0 8.2 5.3 0.0 1.1
ATCTGTACTC 29025 dynactin 3 0.0 6.0 7.2 9.5 10.2 5.3
TATAATCTGT 25575 matrin 3 0.0 6.0 7.2 8.5 1.0 4.2
CTATTAAATA 9257 DNA segment, Chr 10, Wayne State University 52, expressed 0.0 6.0 7.2 5.3 1.0 3.2
GACTGGCTGT 124569 ESTs 0.0 6.0 7.2 5.3 1.0 0.0
GGTTCACACA 4560 low density lipoprotein receptor related protein, associated protein 1 0.0 6.0 7.2 4.2 3.1 4.2
AAGTGTGAAA 131127 RIKEN cDNA 6230410L23 gene 0.0 6.0 7.2 3.2 2.0 1.1
TTTGCTCTTT 30003 RIKEN cDNA 2400001E08 gene 0.0 6.0 6.1 9.5 3.1 3.2
TGGGCAAACT 10009 RIKEN cDNA 2700043I21 gene 0.0 6.0 6.1 5.3 6.1 4.2
ACAGGAATGA 15409 LIM-domain containing, protein kinase 0.0 6.0 6.1 5.3 2.0 0.0
TTACTGGTTA 41409 RIKEN cDNA 0610039J01 gene 60076 EST 0.0 6.0 6.1 4.2 4.1 0.0
TGGAACCTTG 24809 ESTs, Highly similar to dynein light intermediate chain 53/55 [R.norvegicus] 0.0 6.0 6.1 0.0 3.1 1.1
GCCAAAAAAA 30074 ESTs, Highly  similar to 2-OXOGLUTARATE DEHYDROGENASE E1 COMPONENT PRECURSOR [Homo sapiens] 80662 ESTs, Moderately similar to myomegalin [R.norvegicus] 0.0 6.0 5.1 9.5 4.1 2.1
GCTGTTCAAA 12892 ubiquitin-activating enzyme E1C 0.0 6.0 5.1 6.3 5.1 7.4
TTATTAAAAT 41758 RIKEN cDNA 2410030G21 gene 8294 von Hippel-Lindau binding protein 1 0.0 6.0 5.1 5.3 3.1 4.2
TATTTTGCAC 26792 RIKEN cDNA 2310056P07 gene 0.0 6.0 5.1 4.2 2.0 5.3
GTGATGTTTC 31018 RIKEN cDNA 0610009N12 gene 0.0 6.0 5.1 3.2 0.0 1.1
ACTTTGAGAT 41642 ESTs 0.0 6.0 5.1 1.1 0.0 2.1
GCCCCAATAA 28896 phosphatidylcholine transfer protein-like 0.0 6.0 4.1 7.4 11.2 8.4
GTCGTGCCAT 27194 DNA segment, Chr 7, Roswell Park 2 complex, expressed 0.0 6.0 4.1 6.3 1.0 1.1
GCGCAATGCC 5275 ESTs 0.0 6.0 4.1 6.3 0.0 2.1
ATGTACTAAA 41374 Trk-fused gene 0.0 6.0 4.1 5.3 1.0 1.1
GAAATAAATG 1700 RIKEN cDNA 9030612K14 gene 0.0 6.0 4.1 4.2 5.1 6.3
CAGATAATGT 14816 ESTs, Highly similar to choline/ethanolaminephosphotransferase [H.sapiens] 0.0 6.0 4.1 4.2 1.0 0.0
TCACACTTTT 180189 RIKEN cDNA 0610010B06 gene 0.0 6.0 4.1 4.2 0.0 0.0
TGTAAATAAA 165751 ESTs 41756 RIKEN cDNA 1110058L19 gene 0.0 6.0 4.1 3.2 2.0 7.4
TCCAACTTGT 34246 calmodulin 0.0 6.0 4.1 2.1 5.1 0.0
TAATAAAGTG 29895 RIKEN cDNA 0610038F01 gene 0.0 6.0 4.1 2.1 3.1 5.3
GAAAAATATT 30177 RIKEN cDNA 2700047N05 gene 45921 ESTs 0.0 6.0 4.1 2.1 0.0 6.3
TGGACGGTGG 27736 carbonic anhydrase 11 0.0 6.0 4.1 1.1 6.1 0.0
AAGAATTAAA 3860 receptor-like tyrosine kinase 0.0 6.0 4.1 1.1 0.0 1.1
TATTTAGTCC 104491 RIKEN cDNA 1110001C03 gene 0.0 6.0 3.1 4.2 6.1 3.2
TTAACTGCCT 41881 RIKEN cDNA 2900002K07 gene 0.0 6.0 3.1 4.2 3.1 1.1
TTGGAAAAGT 20309 RIKEN cDNA 1110039O14 gene 40681 RIKEN cDNA 4631401E18 gene 0.0 6.0 3.1 4.2 2.0 2.1
TAACAGCTAC 148440 ESTs 29923 Mus musculus 11 days embryo cDNA, RIKEN full-length enriched library, clone:2700096J03, full insert sequence 0.0 6.0 3.1 4.2 0.0 1.1
TTAGATGTTT 16976 RIKEN cDNA 2310012M09 gene 0.0 6.0 3.1 3.2 1.0 2.1
TCCGAACAAA 34750 RIKEN cDNA 1190002C07 gene 0.0 6.0 3.1 2.1 2.0 1.1
TTAATTCATT 24565 translocase of inner mitochondrial membrane 23 homolog (yeast) 0.0 6.0 3.1 1.1 2.0 2.1
TATGCTGTAA 5294 ESTs 0.0 6.0 3.1 1.1 2.0 2.1
GTGAGAAAAT 24829 RIKEN cDNA 2310046N15 gene 0.0 6.0 3.1 0.0 1.0 0.0
GGAAATTAAA 18218 ganglioside-induced differentiation-associated-protein 1 87376 ESTs, Moderately similar to T00364 hypothetical protein KIAA0673 [H.sapiens] 0.0 6.0 2.0 7.4 0.0 0.0
AGACAAAAAA 2344 guanine nucleotide binding protein, beta 1 0.0 6.0 2.0 6.3 21.4 31.6
AGTACTCGAA 28761 serine/threonine kinase 25 (Ste20, yeast homolog) 0.0 6.0 2.0 6.3 1.0 4.2
TGTATAAAAT 22774 tubulin, beta 2 0.0 6.0 2.0 6.3 0.0 0.0
GTGAAACTAC 28350 ESTs 66 ribosomal protein S4, X-linked 0.0 6.0 2.0 5.3 4.1 1.1
CACAAAAGTC 44876 Mus musculus narf mRNA for neural activity-related ring finger protein, complete cds 0.0 6.0 2.0 5.3 3.1 2.1
AGGCTCTCCA 14318 Mus musculus germline imuunoglobulin gamma constant region (IgG3) mRNA 0.0 6.0 2.0 5.3 3.1 0.0
AGCAAATCCA 87670 ESTs 0.0 6.0 2.0 3.2 14.3 3.2
TCCAACCCAA 7381 RIKEN cDNA 2210020B17 gene 0.0 6.0 2.0 3.2 10.2 0.0
TGAGTTACAG 1441 nucleosome assembly protein 1-like 2 0.0 6.0 2.0 3.2 2.0 0.0
GGGAGGGAAG 25136 N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase 2559 uridine monophosphate kinase 3444 bromodomain-containing 2 0.0 6.0 2.0 3.2 0.0 4.2
AGGGGGCTTT 41774 ESTs, Weakly similar to I52657 gene SEZ-6 [M.musculus] 0.0 6.0 2.0 2.1 2.0 2.1
AAATAAATAA 0.0 6.0 2.0 2.1 0.0 14.7
TGTGTGAACT 19092 ESTs 64573 RIKEN cDNA 2810432H05 gene 0.0 6.0 2.0 1.1 2.0 0.0
ACTGTTCTTA 26775 ESTs, Weakly similar to AF151109 1 putative BRCA1-interacting protein [H.sapiens] 0.0 6.0 2.0 1.1 1.0 2.1
GTCGCAGGCA 30206 RIKEN cDNA 1110004P10 gene 0.0 6.0 2.0 0.0 7.1 1.1
TAGTACTGTT 24678 Mus musculus PAR6A (Par6a) mRNA, complete cds 99905 ESTs 0.0 6.0 2.0 0.0 1.0 1.1
GCTGAAATGC 78093 ESTs 0.0 6.0 2.0 0.0 0.0 0.0
TCTGCCTGCA 22123 DNA segment, Chr 15, Wayne State University 75, expressed 39090 glutamate receptor, ionotropic, NMDA2C (epsilon 3) 0.0 6.0 1.0 11.6 6.1 5.3
GGAGGCCACC 133687 ESTs, Weakly similar to JC7286 liver-specific organic anion transporter-1 - mouse [M.musculus] 7630 ESTs 0.0 6.0 1.0 6.3 8.1 3.2
TTCTAGTTGC 21092 butyrate-induced transcript 1 0.0 6.0 1.0 6.3 6.1 2.1
ACAAAAAAAA 23288 eomesodermin homolog (Xenopus laevis) 2823 B-cell translocation gene 3 2992 myelin basic protein 0.0 6.0 1.0 6.3 0.0 3.2
TGCATATGTC 45151 RIKEN cDNA 1700043E15 gene 0.0 6.0 1.0 5.3 3.1 6.3
CTTAAAAAAA 30560 ESTs 41209 RAS protein activator like 1 (GAP1 like) 41881 RIKEN cDNA 2900002K07 gene 47539 ESTs 0.0 6.0 1.0 3.2 1.0 0.0
GAGTTGGAGC 153487 ESTs 28584 RIKEN cDNA 9030401P18 gene 0.0 6.0 1.0 3.2 0.0 1.1
TAAGAGGTGC 39067 ESTs, Moderately  similar to FIBROPELLIN C PRECURSOR [Strongylocentrotus purpuratus] 0.0 6.0 1.0 2.1 4.1 0.0
TGGTGAAAAA 0.0 6.0 1.0 2.1 2.0 1.1
TCTAAAAAAA 28373 Bcl2-associated athanogene 3 29194 RIKEN cDNA 1700094M07 gene 30204 RIKEN cDNA 2610008L04 gene 87650 RIKEN cDNA 3732413A17 gene 0.0 6.0 1.0 2.1 1.0 2.1
TTAGCAACTC 143801 ataxin 2 binding protein 1 0.0 6.0 1.0 2.1 1.0 0.0
ACAAGACACA 33729 RIKEN cDNA 1300006L01 gene 45976 ESTs 0.0 6.0 1.0 2.1 0.0 1.1
CAGCTCTGCC 29857 neurogranin (protein kinase C substrate, RC3) 0.0 6.0 1.0 2.1 0.0 0.0
TTGAATTAAA 3572 RIKEN cDNA 1110033J19 gene 0.0 6.0 1.0 1.1 2.0 3.2
TGCTTTTACA 5934 RIKEN cDNA 2310039H09 gene 0.0 6.0 1.0 1.1 2.0 0.0
TTTTTGACTC 182295 EST AI265272 0.0 6.0 1.0 1.1 0.0 2.1
GGACTTAACA 29722 RIKEN cDNA 2010301L15 gene 0.0 6.0 1.0 1.1 0.0 0.0
GTTGCCCTCC mito Tag matches mitochondrial sequence 0.0 6.0 1.0 0.0 13.2 2.1
GAAGATGAGC 46735 RIKEN cDNA 3110037E15 gene 5083 RAB3A, member RAS oncogene family 0.0 6.0 1.0 0.0 8.1 4.2
AGCCTCCCTT 171498 RIKEN cDNA 2210017D18 gene 17675 RIKEN cDNA 5031433I09 gene 181881 RIKEN cDNA 2610003J06 gene 29000 STIP1 homology and U-Box containing protein 1 0.0 6.0 1.0 0.0 7.1 0.0
TCGGCTCCGA 138866 apolipoprotein E 0.0 6.0 1.0 0.0 3.1 0.0
GGCCCACATC 23671 RIKEN cDNA 1500031H04 gene 0.0 6.0 1.0 0.0 3.1 0.0
GACATTTCCT 42192 kinase interacting protein 2 0.0 6.0 1.0 0.0 2.0 1.1
TAACAAATAG 29386 RIKEN cDNA 1100001I23 gene 0.0 6.0 1.0 0.0 2.0 0.0
CCGGCCCAGA 16831 creatine kinase, brain 0.0 6.0 1.0 0.0 1.0 0.0
CAATTCTGTT 24577 ESTs, Weakly similar to killer cell inhibitory receptor-like protein p91C [M.musculus] 0.0 6.0 1.0 0.0 0.0 0.0
ATGGGAAGGC 30084 neuronal protein 15.6 0.0 6.0 1.0 0.0 0.0 0.0
ATTCAACTAC 0.0 6.0 1.0 0.0 0.0 0.0
CAACATTTCA 0.0 6.0 1.0 0.0 0.0 0.0
GAGCCAATGT 154907 trophinin like 0.0 6.0 0.0 5.3 3.1 0.0
CATACCTGAA 23960 RIKEN cDNA 3110006E14 gene 0.0 6.0 0.0 5.3 2.0 0.0
CAAGACTGTC 0.0 6.0 0.0 5.3 0.0 0.0
TGTGTTATAA 164287 ESTs 41843 ESTs 0.0 6.0 0.0 3.2 1.0 2.1
GAGCACCCAA 29870 integral membrane protein 3 0.0 6.0 0.0 3.2 1.0 0.0
TTGTACTTAA 25240 ESTs, Weakly similar to CG2803 gene product [D.melanogaster] 38955 RIKEN cDNA 1300003A18 gene 0.0 6.0 0.0 3.2 0.0 3.2
GTCTTTCTAC 21759 RIKEN cDNA 2900054P15 gene 0.0 6.0 0.0 3.2 0.0 1.1
GCCGAAAACT 2779 glycosylphosphatidylinositol specific phospholipase D1 0.0 6.0 0.0 2.1 1.0 0.0
AGAAAAAATA 32961 RIKEN cDNA 2310003L22 gene 0.0 6.0 0.0 2.1 0.0 4.2
ACAGGCAGGA 0.0 6.0 0.0 2.1 0.0 1.1
TGGCACTGTA 108982 ESTs 3679 tetratricopeptide repeat domain 0.0 6.0 0.0 2.1 0.0 0.0
TAAATTAAGA 27816 hexosaminidase B 0.0 6.0 0.0 2.1 0.0 0.0
TAAATAGTTG 25450 ESTs 0.0 6.0 0.0 1.1 3.1 0.0
AAAACTGGGG 28643 vesicle-associated membrane protein 2 0.0 6.0 0.0 1.1 2.0 0.0
CAGGCAAAAA 19310 Mus musculus collagenous repeat-containing sequence of 26kDa protein (CORS26) mRNA, complete cds 6925 SEC8 (S. cerevisiae) 0.0 6.0 0.0 1.1 1.0 3.2
GATCTGTAGA 29728 DNA segment, Chr 13, Wayne State University 156, expressed 0.0 6.0 0.0 1.1 1.0 0.0
ATCGGTTCCA 154915 ribosomal protein S29 212 RIKEN cDNA 1110013G13 gene 0.0 6.0 0.0 1.1 0.0 0.0
GAACTTGTGT 21179 ESTs 0.0 6.0 0.0 1.1 0.0 0.0
GTATTGTGAG 0.0 6.0 0.0 0.0 10.2 0.0
TGTCGTTCAT 28018 RIKEN cDNA 1500006O09 gene 0.0 6.0 0.0 0.0 5.1 2.1
CAGTGACTGC 35844 growth arrest specific 5 0.0 6.0 0.0 0.0 4.1 0.0
TACAATAAAC 13859 ribosomal protein L41 40321 RIKEN cDNA 4631434O19 gene 0.0 6.0 0.0 0.0 3.1 2.1
GCTACTTAAG 117076 G protein-coupled receptor kinase 2, groucho gene related (Drosophila) 2446 synaptotagmin 4 0.0 6.0 0.0 0.0 3.1 0.0
TGTAATACAA 50337 ESTs 0.0 6.0 0.0 0.0 2.0 1.1
TGCCCAAGAA 5163 RAS-like protein expressed in neuron 0.0 6.0 0.0 0.0 2.0 0.0
GCCCAGTGAT 2184 RIKEN cDNA 2510048O06 gene 0.0 6.0 0.0 0.0 1.0 1.1
ATAGACTTTC 29827 staphylococcal nuclease domain containing 1 3156 malate dehydrogenase, soluble 0.0 6.0 0.0 0.0 1.0 1.1
TTTCAAACTT 22627 epidermal growth factor receptor pathway substrate 15 0.0 6.0 0.0 0.0 1.0 0.0
CTGGGCCGTG 29807 ubiquitin carboxy-terminal hydrolase L1 0.0 6.0 0.0 0.0 1.0 0.0
TAATCACCAA 675 ornithine decarboxylase antizyme 2 0.0 6.0 0.0 0.0 1.0 0.0
TTTAAAAAAA 20888 E74-like factor 5 28855 RIKEN cDNA 1500002M01 gene 44606 regulator of G-protein signaling 17 0.0 6.0 0.0 0.0 0.0 4.2
TTAATATACC 141824 DNA segment, Chr 8, Wayne State University 49, expressed 0.0 6.0 0.0 0.0 0.0 1.1
GAATCCAGTA 0.0 6.0 0.0 0.0 0.0 1.1
GGCCGAGGCA 1268 proteolipid protein (myelin) 0.0 6.0 0.0 0.0 0.0 0.0
TAAGAAACCA 1268 proteolipid protein (myelin) 0.0 6.0 0.0 0.0 0.0 0.0
AGTGAGTCCG 154560 maternally expressed gene 3 0.0 6.0 0.0 0.0 0.0 0.0
CTGTAAATAC 158155 RIKEN cDNA 2900097C17 gene 28282 ESTs 90355 ESTs 0.0 6.0 0.0 0.0 0.0 0.0
AGATTGGTGG 1776 ferritin heavy chain 0.0 6.0 0.0 0.0 0.0 0.0
GCGAGACGCT 2992 myelin basic protein 0.0 6.0 0.0 0.0 0.0 0.0
CCACAACCAC 38994 RIKEN cDNA 2600001N01 gene 0.0 6.0 0.0 0.0 0.0 0.0
CAGGAAGGAT 4032 regulated endocrine-specific protein 18 0.0 6.0 0.0 0.0 0.0 0.0
ATAGCTCGCA 41808 ESTs 0.0 6.0 0.0 0.0 0.0 0.0
GAGCTGAGAC 6190 arginine vasopressin 0.0 6.0 0.0 0.0 0.0 0.0
TAAAGTCAAA 81161 RIKEN cDNA 1110067B02 gene 0.0 6.0 0.0 0.0 0.0 0.0
ACGTCAATCT 0.0 6.0 0.0 0.0 0.0 0.0
CGAAGAGCAG 0.0 6.0 0.0 0.0 0.0 0.0
TATGTGACCA 0.0 6.0 0.0 0.0 0.0 0.0
GTTGAGGTTT 10009 RIKEN cDNA 2700043I21 gene 0.0 5.0 32.7 27.5 28.5 24.2
TCTGTAATTG 12625 microtubule-associated protein 4 0.0 5.0 25.5 8.5 19.3 5.3
GGATTTTGAT 132269 ESTs 3644 fatty acid binding protein 7, brain 0.0 5.0 25.5 2.1 0.0 0.0
TGCTGCACGT 20354 kinesin light chain 1 0.0 5.0 24.5 9.5 11.2 2.1
GCCATTGGAA 27477 RIKEN cDNA 2010100O12 gene 0.0 5.0 21.5 13.7 14.3 0.0
AAGCCTCATT 3268 ubiquitin-conjugating enzyme E2I 0.0 5.0 20.4 7.4 5.1 6.3
TGTTGATTGG 27624 RIKEN cDNA C530002L11 gene 0.0 5.0 18.4 19.0 15.3 4.2
GGCAGCAAAC 32790 ESTs, Weakly similar to podocalyxin-like protein 1 [M.musculus] 0.0 5.0 18.4 9.5 10.2 0.0
CTCCTGAAGG 1485 ubiquitin-conjugating enzyme 4 41588 ESTs 0.0 5.0 16.3 22.2 9.2 5.3
TGGAGCAGAC 28778 ESTs, Weakly similar to ATP-binding cassette transporter [M.musculus] 0.0 5.0 15.3 19.0 15.3 9.5
AGTGAATGCA 41752 ESTs 0.0 5.0 15.3 18.0 11.2 1.1
TTGTATAATA 658 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 0.0 5.0 15.3 2.1 2.0 3.2
TTAGGCAGCT 20154 ESTs, Moderately  similar to THYMOSIN BETA-4 [Xenopus laevis] 0.0 5.0 14.3 15.9 6.1 6.3
CCTTTTCCTT 28084 guanosine diphosphate (GDP) dissociation ihibitor 1 0.0 5.0 14.3 4.2 11.2 7.4
GAGAGAAATG 112459 ESTs 41773 RIKEN cDNA 1500015G18 gene 0.0 5.0 12.3 6.3 8.1 7.4
CTGATGTCAT 22242 ESTs 0.0 5.0 11.2 10.6 11.2 8.4
TGTGCCCCAG 132311 ESTs 177751 ESTs 38551 calcium binding protein 1 0.0 5.0 11.2 7.4 17.3 3.2
TTCTTTCTAA 22505 steroid dehydrogenase 30211 small inducible cytokine subfamily B (Cys-X-Cys), member 14 0.0 5.0 11.2 7.4 5.1 4.2
ACACATTATT 128121 ESTs 7723 poly(A) binding protein, nuclear 1 0.0 5.0 11.2 7.4 5.1 0.0
CTCGAGAAAC 158270 RIKEN cDNA 1700021B03 gene 20313 RIKEN cDNA 0710001P09 gene 0.0 5.0 11.2 5.3 1.0 0.0
CATTGTGTGG 38392 BCR downstream signaling 1 89564 pregnancy upregulated non-ubiquitously expressed CaM kinase 0.0 5.0 11.2 3.2 0.0 0.0
TGAAAATCTT 2777 tumor protein D52 0.0 5.0 10.2 14.8 8.1 6.3
GAAATAAAGT 28830 pre-B-cell colony-enhancing factor 33421 RIKEN cDNA 1110012J17 gene 6929 DNA segment, Chr 17, ERATO Doi 197, expressed 0.0 5.0 10.2 9.5 5.1 5.3
ACTTAGTGGC 28584 RIKEN cDNA 9030401P18 gene 0.0 5.0 10.2 7.4 9.2 3.2
TTTGTTAATT 21740 heterogeneous nuclear ribonucleoprotein H1 0.0 5.0 10.2 6.3 5.1 8.4
ATAGTAAGCT 13194 fascin homolog 1 (actin bundling protein, Strongylocentrotus purpuratus) 0.0 5.0 9.2 8.5 1.0 0.0
GAGCCTCACA 10091 protein kinase inhibitor, gamma 0.0 5.0 9.2 7.4 8.1 5.3
TGAACTGTGT 45991 RIKEN cDNA 2900054O13 gene 0.0 5.0 9.2 5.3 3.1 2.1
TAGTTAATGT 4429 ubiquitin-conjugating enzyme 5 0.0 5.0 9.2 5.3 3.1 1.1
GTTTAAAAAG 29580 superiorcervical ganglia, neural specific 10 0.0 5.0 9.2 4.2 1.0 0.0
GTCTGTGGCA 37726 ESTs 44778 ESTs 74661 ESTs, Weakly similar to LOK [M.musculus] 0.0 5.0 8.2 6.3 8.1 0.0
TGGTGCACGT 29032 DNA segment, Chr 10, ERATO Doi 214, expressed 0.0 5.0 8.2 6.3 3.1 4.2
CAGACTTGGT 158645 RIKEN cDNA 5133400F09 gene 29879 RIKEN cDNA 5031412I06 gene 55064 ESTs 0.0 5.0 8.2 5.3 3.1 2.1
GGTCACATCT 38527 ESTs 0.0 5.0 8.2 2.1 5.1 2.1
TATCCAGCCA 41380 ESTs, Highly  similar to EYE-SPECIFIC DIACYLGLYCEROL KINASE [Drosophila melanogaster] 0.0 5.0 8.2 2.1 2.0 0.0
TTGTTCCAAT 29412 nuclear receptor co-repressor 2 0.0 5.0 8.2 1.1 4.1 2.1
TGCCTTACTT 24254 programmed cell death 6 0.0 5.0 7.2 8.5 5.1 3.2
CAATAAAACA 1340 M.musculus RNA for 18.8 family from nasopharyngeal carcinoma tumour 182425 RIKEN cDNA 2900019I22 gene 23755 RIKEN cDNA 2310075M17 gene 0.0 5.0 7.2 7.4 3.1 8.4
ATGTGAATAA 3571 ubiquitin specific protease 5 (isopeptidase T) 0.0 5.0 7.2 7.4 1.0 6.3
ATGACTGTGG 19119 RIKEN cDNA 2210402C18 gene 0.0 5.0 7.2 5.3 3.1 0.0
TACTACTTTG 30133 ethanol induced 6 0.0 5.0 7.2 4.2 1.0 3.2
GTTGGGAGCT 2397 synaptophysin 0.0 5.0 7.2 3.2 14.3 4.2
AAGGCAGAGG 25316 ESTs, Highly  similar to ATP-CITRATE [Rattus norvegicus] 34451 RIKEN cDNA 1110007F05 gene 0.0 5.0 7.2 3.2 1.0 6.3
GGATGATGAA 2376 nuclear receptor subfamily 2, group F, member 6 0.0 5.0 7.2 2.1 4.1 1.1
TTCTTGACTT 34650 paralemmin 87419 RIKEN cDNA 1700112C13 gene 0.0 5.0 7.2 1.1 5.1 1.1
AATTACAAGC 4024 cofilin 1, non-muscle 0.0 5.0 7.2 1.1 0.0 0.0
TGGCCTGAGT 27862 ESTs, Weakly similar to weakly similar to gastrula zinc finger protein [C.elegans] 0.0 5.0 6.1 12.7 9.2 2.1
TTTTGGTGTA 26101 ESTs 0.0 5.0 6.1 4.2 2.0 6.3
AAGGACTATG 29821 peroxiredoxin 3 0.0 5.0 6.1 4.2 2.0 0.0
GAGACTTCAA 34319 tyrosine 3-monooxgenase/tryptophan 5-monooxgenase activation protein, beta polypeptide 0.0 5.0 6.1 0.0 3.1 0.0
GTGACTTTGC 24383 ESTs, Weakly similar to unnamed protein product [M.musculus] 0.0 5.0 5.1 16.9 17.3 13.7
TGACCAAGTA 21848 RIKEN cDNA 1200015E15 gene 0.0 5.0 5.1 8.5 3.1 3.2
GTGAGCTTGT 176 TAR (HIV) RNA binding protein 2 0.0 5.0 5.1 6.3 5.1 1.1
GTCCTTTTTC 29405 ring-box 1 0.0 5.0 5.1 6.3 2.0 2.1
TCAAAATGTT 28205 ESTs, Highly similar to KIAA1468 protein [H.sapiens] 0.0 5.0 5.1 6.3 2.0 1.1
GCAAAGAAAA 20348 nidogen 2 29729 tweety homolog 1 (Drosophila) 71901 EST 0.0 5.0 5.1 4.2 5.1 2.1
GTACATTGTA 178528 RIKEN cDNA 1500026B10 gene 0.0 5.0 5.1 3.2 3.1 1.1
GCCCCCGCAT 34570 Mus musculus 18 days embryo cDNA, RIKEN full-length enriched library, clone:1110003G10, full insert sequence 0.0 5.0 5.1 3.2 1.0 0.0
CTCACATAAC 3193 protein kinase inhibitor, alpha 0.0 5.0 5.1 2.1 4.1 2.1
TTCCATTTAA 2485 nuclear DNA-binding protein 0.0 5.0 5.1 2.1 2.0 2.1
ATGACATAGA 24575 ESTs 0.0 5.0 5.1 2.1 2.0 1.1
TAGCTAGCCC 2991 opioid receptor-like 0.0 5.0 5.1 2.1 1.0 0.0
ACAGAATTAT 41791 glycoprotein m6b 0.0 5.0 5.1 1.1 1.0 1.1
TAAAAGTTGT 14744 syndecan binding protein 34198 ESTs, Weakly similar to BRCA1-associated RING domain protein [M.musculus] 0.0 5.0 5.1 1.1 1.0 0.0
AATAAACGCC 36335 DNA segment, Chr 1, Wayne State University 40, expressed 0.0 5.0 5.1 0.0 0.0 1.1
CCACACAGAT 1843 heat shock protein, 86 kDa 1 0.0 5.0 4.1 14.8 3.1 16.9
TTTGGATGTT 25575 matrin 3 0.0 5.0 4.1 12.7 1.0 3.2
TGTGTCATTT 132697 ESTs 23720 RIKEN cDNA 2310067G05 gene 0.0 5.0 4.1 7.4 7.1 0.0
TCTGGCACTG 28618 RIKEN cDNA 2410004D02 gene 0.0 5.0 4.1 7.4 4.1 0.0
TCAAACTGCT 0.0 5.0 4.1 5.3 2.0 7.4
CGGGCTGCGG 39990 RIKEN cDNA 1110049F14 gene 0.0 5.0 4.1 5.3 2.0 1.1
ACAAATTATG 569 voltage-dependent anion channel 2 0.0 5.0 4.1 4.2 3.1 3.2
CCTTTCAAAA 22593 general transcription factor II I 0.0 5.0 4.1 4.2 2.0 4.2
TAAATCAAAG 23833 ESTs, Moderately similar to AF133124 1 transcription factor IIIC63 [H.sapiens] 0.0 5.0 4.1 4.2 0.0 0.0
CGCCACCACG 103863 RIKEN cDNA 2810040C05 gene 33206 RIKEN cDNA 1300013D05 gene 0.0 5.0 4.1 2.1 13.2 8.4
TAGAGCTTTA 27182 ESTs, Highly  similar to ELONGATION FACTOR TU, MITOCHONDRIAL PRECURSOR [Bos taurus] 0.0 5.0 4.1 2.1 6.1 6.3
TGGTCAGGAC 87720 RIKEN cDNA 1500006I01 gene 0.0 5.0 4.1 2.1 6.1 1.1
GGTTGTATGT 115351 ESTs 38578 ESTs 0.0 5.0 4.1 2.1 5.1 3.2
ATGGCTTAAT 28909 protein tyrosine phosphatase 4a1 0.0 5.0 4.1 2.1 1.0 3.2
CCCTGAGGGG 37214 alpha-2-HS-glycoprotein 0.0 5.0 4.1 2.1 1.0 2.1
GTCCAAGAAC 14663 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g 0.0 5.0 4.1 2.1 0.0 0.0
TTTTATTTTG 41582 RIKEN cDNA 2310002J21 gene 42027 kinesin heavy chain member 1B 0.0 5.0 4.1 1.1 5.1 4.2
GTTGGATTAT 0.0 5.0 4.1 1.1 2.0 3.2
TGGATGTGAA 19154 succinate-Coenzyme A ligase, ADP-forming, beta subunit 0.0 5.0 4.1 1.1 0.0 0.0
GTTAAAAAAA 1155 tubulin alpha 4 161903 ESTs 29992 RIKEN cDNA 8430411F12 gene 41678 RIKEN cDNA 2610507E10 gene 0.0 5.0 3.1 8.5 0.0 2.1
AATGGATGCA 7634 lymphoid blast crisis-like 1 0.0 5.0 3.1 7.4 4.1 3.2
TGTTCCACAC 15351 RIKEN cDNA 1110054N06 gene 0.0 5.0 3.1 6.3 6.1 1.1
TTCTGGAAGC 104919 RIKEN cDNA 6430539P16 gene 143141 eukaryotic translation initiation factor 1A 0.0 5.0 3.1 6.3 4.1 3.2
GGCAGCCCAG 11112 RIKEN cDNA 2210013K02 gene 0.0 5.0 3.1 6.3 1.0 4.2
CTCACCCAGG 29471 RIKEN cDNA 4733401H18 gene 0.0 5.0 3.1 5.3 8.1 4.2
TGGATTTCTT 41711 ESTs, Moderately similar to neurodegeneration-associated protein 1 [R.norvegicus] 0.0 5.0 3.1 4.2 2.0 0.0
GCACCTGATG 32077 Mus musculus Down syndrome cell adhesion molecule (Dscam) mRNA, complete cds 0.0 5.0 3.1 4.2 0.0 0.0
TGAGCATCAA 28470 RIKEN cDNA 0910001B06 gene 0.0 5.0 3.1 3.2 1.0 4.2
TCTTGGGCTG 27348 v-ral simian leukemia viral oncogene homolog A (ras related) 0.0 5.0 3.1 3.2 1.0 0.0
AACCGTACTG 25483 ESTs 0.0 5.0 3.1 3.2 0.0 4.2
TGACCCCGGC 0.0 5.0 3.1 3.2 0.0 0.0
AACATCATCC 8688 RIKEN cDNA 0610011B04 gene 0.0 5.0 3.1 2.1 3.1 3.2
GTGCTTTGTA 154132 Mus musculus major histocompatibility locus class III region:butyrophilin-like protein gene, partial cds; Notch4, PBX2, RAGE, lysophatidic acid acyl transferase-alpha, palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and tenascin X (TNX) genes, complete cds; and CYP21OHB pseudogene, complete sequence 4052 ESTs, Highly similar to bK1048E9.5 [H.sapiens] 0.0 5.0 3.1 2.1 2.0 3.2
TCGTCATCCG 14245 RIKEN cDNA 2700049I22 gene 0.0 5.0 3.1 2.1 0.0 0.0
AAACTGAAGA 24805 RIKEN cDNA 2210415M14 gene 41254 DNA segment, Chr 9, ERATO Doi 809, expressed 0.0 5.0 3.1 1.1 2.0 7.4
TTAATACAAC 18526 EH-domain containing 3 0.0 5.0 3.1 1.1 2.0 0.0
GGGTGGGGGA 44323 ESTs 0.0 5.0 3.1 1.1 2.0 0.0
AGGACAGTGC 30017 RIKEN cDNA 0610012F20 gene 0.0 5.0 3.1 1.1 1.0 3.2
AAAAAATAAA 28560 Ly1 antibody reactive clone 34580 TANK-binding kinase 1 0.0 5.0 3.1 1.1 0.0 12.6
TGCTCACGCA 44552 thioredoxin reductase 1 0.0 5.0 3.1 0.0 1.0 0.0
TCAAGATTTT 2025 survival motor neuron 0.0 5.0 3.1 0.0 0.0 0.0
GCTGACTCTT 29358 RIKEN cDNA 2700055K07 gene 0.0 5.0 2.0 11.6 8.1 3.2
GGGGACGCAT 34191 ESTs, Weakly similar to CG10898 gene product [D.melanogaster] 0.0 5.0 2.0 9.5 1.0 0.0
GCAGGCTGGG 16773 serum albumin variant 183016 thymine DNA glycosylase 0.0 5.0 2.0 7.4 5.1 1.1
TGTAGTTCCA 42944 transcription elongation factor B (SIII), polypeptide 1 (15 kDa),-like 0.0 5.0 2.0 7.4 1.0 3.2
TTACAGAAAT 12001 TATA box binding protein (TBP) associated factor, RNA polymerase II, F, 55 kDa 20413 hydroxyacid oxidase (glycolate oxidase) 3 24609 ESTs 0.0 5.0 2.0 5.3 0.0 1.1
ATGCTAAAAA 147946 MYB binding protein (P160) 1a 0.0 5.0 2.0 5.3 0.0 1.1
CAGAGTCAAA 33941 amylase 1, salivary 0.0 5.0 2.0 4.2 10.2 4.2
TGTATAAATA 20922 mitogen activated protein, binding protein 0.0 5.0 2.0 4.2 2.0 1.1
GTGATGCGGA 10738 phosphoglycerate mutase muscle-specific subunit 0.0 5.0 2.0 4.2 0.0 2.1
GAAAACAAAA 17891 ESTs 182574 RIKEN cDNA 2610034N03 gene 33801 ESTs 0.0 5.0 2.0 4.2 0.0 1.1
CAAATTAAAC 44971 ESTs 0.0 5.0 2.0 3.2 1.0 2.1
TTGAAGCATA 44856 ESTs 7156 glutathione peroxidase 3 87388 RIKEN cDNA 2310046K01 gene 0.0 5.0 2.0 3.2 1.0 0.0
TCAGTATGTA 143768 f-box only protein 3 21617 DNA segment, Chr 3, ERATO Doi 194, expressed 0.0 5.0 2.0 3.2 0.0 0.0
GAAGACGACG 9590 neighbor of A-kinase anchoring protein 95 0.0 5.0 2.0 2.1 12.2 5.3
GCACACTATT 23836 RIKEN cDNA 0610011A07 gene 3248 transforming growth factor beta 1 induced transcript 1 0.0 5.0 2.0 2.1 6.1 0.0
TGTCACAAAA 20929 hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2 0.0 5.0 2.0 2.1 5.1 2.1
GGAATAAAGA 151790 kelch-like ECH-associated protein 1 0.0 5.0 2.0 2.1 1.0 3.2
TTGTGTGTTT 32744 opsin (encephalopsin) 0.0 5.0 2.0 2.1 1.0 0.0
TTTTCTTCGC 130359 ESTs 0.0 5.0 2.0 2.1 0.0 0.0
ACTCCGGGGA 41612 ESTs 0.0 5.0 2.0 1.1 1.0 0.0
TAAAGAAATA 46475 RIKEN cDNA 5730422A13 gene 0.0 5.0 2.0 1.1 0.0 2.1
ACAAAAGGAT 131074 RIKEN cDNA C030048H19 gene 0.0 5.0 2.0 1.1 0.0 1.1
AACCTTCAGC 13886 suppressor of initiator codon mutations, related sequence 1 (S. cerevisiae) 0.0 5.0 2.0 1.1 0.0 0.0
GAAAAAGGAT 28427 lurcher transcript 1 29815 ESTs, Highly  similar to S-ADENOSYLMETHIONINE SYNTHETASE GAMMA FORM [Rattus norvegicus] 0.0 5.0 2.0 1.1 0.0 0.0
TGCCAGGGTG 0.0 5.0 2.0 1.1 0.0 0.0
CAAAGACAAC 3035 RIKEN cDNA 3110006P09 gene 0.0 5.0 2.0 0.0 4.1 0.0
TAGTGCATAT 52067 RIKEN cDNA 5830413B11 gene 0.0 5.0 2.0 0.0 3.1 0.0
TATAGCTGTA 21485 DNA segment, Chr 10, Brigham & Women's Genetics 0791 expressed 0.0 5.0 2.0 0.0 2.0 2.1
TACATACATA 15512 potassium voltage gated channel, shaker related subfamily, beta member 2 0.0 5.0 2.0 0.0 2.0 1.1
GTGGGAATAG 1466 inhibitor of DNA binding 2 0.0 5.0 2.0 0.0 1.0 0.0
TTGGAGAAAG 38108 RIKEN cDNA 2810404O15 gene 41765 RIKEN cDNA 9030425E11 gene 459 cellular repressor of E1A-stimulated genes 0.0 5.0 2.0 0.0 0.0 2.1
TAGAAAATCA 182377 RIKEN cDNA 9130402O08 gene 32815 ESTs 0.0 5.0 2.0 0.0 0.0 0.0
TAAATAAAAC 20826 G1 to phase transition 2 28392 deformed epidermal autoregulatory factor 1 (Drosophila) 4454 ELK3, member of ETS oncogene family 0.0 5.0 2.0 0.0 0.0 0.0
TAGCAGACAG 32646 RIKEN cDNA 1110060O18 gene 0.0 5.0 1.0 6.3 1.0 1.1
CAAGTAATCG 29868 RIKEN cDNA 1810024D14 gene 0.0 5.0 1.0 5.3 0.0 2.1
TAGACCAGGC 162949 ESTs 74226 ESTs 0.0 5.0 1.0 4.2 3.1 4.2
ATTGTTCACT 20260 malonyl-CoA decarboxylase 0.0 5.0 1.0 4.2 2.0 1.1
GTGAAATTAT 28650 RAB6, member RAS oncogene family 0.0 5.0 1.0 4.2 2.0 1.1
GGCAGATAGG 31800 ESTs 0.0 5.0 1.0 4.2 2.0 0.0
TATACAAAGT 29590 Mus musculus E2F-like transcriptional repressor protein mRNA, complete cds 0.0 5.0 1.0 4.2 1.0 0.0
TTGTCTCCCA 40848 ESTs 0.0 5.0 1.0 4.2 0.0 0.0
GCAGAAAGTG 171116 ESTs 18590 transmembrane 4 superfamily member 2 0.0 5.0 1.0 3.2 3.1 2.1
TAGCTATGGA 24629 RIKEN cDNA 2810439F02 gene 0.0 5.0 1.0 3.2 3.1 1.1
TGTTTTTGTT 143768 f-box only protein 3 0.0 5.0 1.0 3.2 1.0 1.1
AGAAAAGTAT 45726 ESTs 0.0 5.0 1.0 3.2 1.0 0.0
TTGAAGGCAT 5341 defensin beta 1 0.0 5.0 1.0 3.2 0.0 1.1
CGGTCTAGTC 41603 ESTs 0.0 5.0 1.0 3.2 0.0 0.0
TGTGCAAAAA 27454 phosphoribosyl pyrophosphate synthetase 1 32850 ESTs, Weakly similar to GTA4_HUMAN GLUTATHIONE S-TRANSFERASE A4-4 [H.sapiens] 0.0 5.0 1.0 2.1 9.2 6.3
TAATTTGATT 18485 RIKEN cDNA 2700059C12 gene 0.0 5.0 1.0 2.1 2.0 2.1
TCAAGAAATT 2141 proteaseome (prosome, macropain) 28 subunit, 3 0.0 5.0 1.0 2.1 2.0 1.1
ACGTGGCGCA 34246 calmodulin 0.0 5.0 1.0 2.1 1.0 0.0
TTCAGCCCGT 154915 ribosomal protein S29 0.0 5.0 1.0 2.1 0.0 1.1
TATCCAGTTG 4172 stem-loop binding protein 0.0 5.0 1.0 2.1 0.0 1.1
CTGCAACTGT 157306 RIKEN cDNA 2610009M20 gene 29050 RIKEN cDNA 1300017C12 gene 0.0 5.0 1.0 2.1 0.0 0.0
TAAGCAAGAG 4296 synovial sarcoma, translocated to X chromosome 0.0 5.0 1.0 1.1 6.1 0.0
GCAGTCACAG 28308 NK6 transcription factor related, locus 2 (Drosophila) 0.0 5.0 1.0 1.1 2.0 0.0
TATGAATAGT 153383 ESTs, Highly similar to similar to Yeast translation activator GCN1 [H.sapiens] 157101 RIKEN cDNA C330007P06 gene 0.0 5.0 1.0 1.1 1.0 0.0
TAAGAATAAA 30928 RIKEN cDNA 2610002D09 gene 0.0 5.0 1.0 1.1 0.0 2.1
TGGGCCCCTG 20841 RIKEN cDNA 2410043G19 gene 6575 cytochrome P450, 24 0.0 5.0 1.0 1.1 0.0 0.0
TAGAGTTTGA 24738 ESTs 0.0 5.0 1.0 1.1 0.0 0.0
AGTTTTTGTT 0.0 5.0 1.0 1.1 0.0 0.0
TCATTATTGA 141187 trans-golgi network protein 2 0.0 5.0 1.0 0.0 4.1 2.1
GTGATATTTA 20476 vacuolar adenosine triphosphatase subunit C 0.0 5.0 1.0 0.0 2.0 1.1
CTGTAATGAT 4435 synaptosomal-associated protein, 25 kDa mito Tag matches mitochondrial sequence 0.0 5.0 1.0 0.0 2.0 1.1
CTCACAAGAA 1147 Mus musculus calmodulin III (Calm3) mRNA, 3' untranslated region 183034 ESTs, Weakly similar to T14039 protein kinase [R.norvegicus] 0.0 5.0 1.0 0.0 0.0 0.0
TGTGTTGCTA 33027 ESTs 0.0 5.0 1.0 0.0 0.0 0.0
ATGTCAGTGT 856 transmembrane 4 superfamily member 1 0.0 5.0 1.0 0.0 0.0 0.0
CAGAGAGTTT 0.0 5.0 1.0 0.0 0.0 0.0
TATCAAGATT 22584 serine/threonine kinase receptor associated protein 0.0 5.0 0.0 9.5 2.0 3.2
GGAGGTCCTG 10141 X-linked nuclear protein 0.0 5.0 0.0 7.4 2.0 0.0
CTGATGTGAA 86134 ESTs 0.0 5.0 0.0 6.3 1.0 0.0
TGCAAAAAAA 28277 RIKEN cDNA 2810468K05 gene 0.0 5.0 0.0 5.3 3.1 4.2
TCCGGTAGGC 2338 glutamine synthetase 0.0 5.0 0.0 5.3 2.0 3.2
CAAGTTCTTT 142729 prothymosin beta 4 0.0 5.0 0.0 5.3 1.0 0.0
CCTGAACACA 181464 RIKEN cDNA 1500032B08 gene 0.0 5.0 0.0 4.2 3.1 1.1
GAGTTTAGGC 141443 lactate dehydrogenase 1, A chain 0.0 5.0 0.0 4.2 2.0 4.2
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