Table S2. SAGE tag levels for nonretinal, P10.5, adult retina, and ONL libraries This lists a full breakdown of all SAGE tags from the following libraries: 3T3 cells, hypothalamus, P10.5 crx-/-, P10.5 crx+/+, adult whole retina and adult microdissected outer nuclear layer (ONL).  Tag totals are normalized to 55,000.  The Gene field contains the mouse Unigene number assignment for the tag followed by the gene name.  Tags with multiple predicted identities are listed together in the Gene column.
Tag	Gene	3t3	hypothalamus	P10.5 crx-/-	P10.5 crx+/+	adult retina	ONL
CAGGCAAAGT	171795 ESTs	1.9	0.0	0.0	0.0	0.0	1.1
GGCCACTGAA	17686 ESTs	1.9	0.0	0.0	0.0	0.0	1.1
ATGATGAAGG	17850 ESTs 27215 EST AI461938	1.9	0.0	0.0	0.0	0.0	1.1
TGCACAGGGG	180052 Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500034D03, full insert sequence	1.9	0.0	0.0	0.0	0.0	1.1
CCTTCTTCCT	181302 RIKEN cDNA 0610007L01 gene 35041 ESTs	1.9	0.0	0.0	0.0	0.0	1.1
TTGGCTGCAA	182912 RIKEN cDNA 1010001P14 gene	1.9	0.0	0.0	0.0	0.0	1.1
AATGAGACCT	19029 interferon-stimulated protein (20 kDa)	1.9	0.0	0.0	0.0	0.0	1.1
GGGATGGGAG	20156 RIKEN cDNA 2610042F04 gene	1.9	0.0	0.0	0.0	0.0	1.1
TCCTCGAATG	20521 histone deacetylase 3	1.9	0.0	0.0	0.0	0.0	1.1
GGGTGAGAGG	20915 topoisomerase (DNA) III beta	1.9	0.0	0.0	0.0	0.0	1.1
TAGCTCTGGC	20945 regulator of G-protein signaling 19 2446 synaptotagmin 4 37871 ESTs	1.9	0.0	0.0	0.0	0.0	1.1
GTGGCACGCA	2137 transcriptional regulator, SIN3B (yeast)	1.9	0.0	0.0	0.0	0.0	1.1
GGGCCCAGTG	21387 LIM and SH3 protein 1 833 adaptor protein complex AP-1, sigma 1	1.9	0.0	0.0	0.0	0.0	1.1
GTATTCTTCC	21619 RIKEN cDNA 2700012F11 gene	1.9	0.0	0.0	0.0	0.0	1.1
GACAGCAGCA	21671 Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110032P20, full insert sequence	1.9	0.0	0.0	0.0	0.0	1.1
GCAGCTCAAA	22314 ATP-binding cassette, sub-family A (ABC1), member 3 35936 ESTs	1.9	0.0	0.0	0.0	0.0	1.1
AATTTTGTGT	22358 RIKEN cDNA 1500004O14 gene	1.9	0.0	0.0	0.0	0.0	1.1
CACAAACCCA	22626 fibulin 1	1.9	0.0	0.0	0.0	0.0	1.1
GCGGTACACT	23207 RIKEN cDNA 5430432P15 gene	1.9	0.0	0.0	0.0	0.0	1.1
GTAGCCTGCA	2322 proviral integration site 1	1.9	0.0	0.0	0.0	0.0	1.1
TAAATTCAGG	23470 ESTs 24513 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 13	1.9	0.0	0.0	0.0	0.0	1.1
TGTGAGGGTC	23561 EST AA589509	1.9	0.0	0.0	0.0	0.0	1.1
AGTCTTAGAA	24680 aspartyl aminopeptidase	1.9	0.0	0.0	0.0	0.0	1.1
AGCAATGGGC	2551 SEC22 vesicle trafficking protein-like 1 (S. cerevisiae)	1.9	0.0	0.0	0.0	0.0	1.1
CAGCTTAAAG	26688 thrombospondin 2	1.9	0.0	0.0	0.0	0.0	1.1
TGTGTCTGTA	26888 ESTs	1.9	0.0	0.0	0.0	0.0	1.1
ACTGTTGCCT	27320 ESTs, Highly similar to AC006042 1 supported by human ESTs AI681256.1(NID:g4891438),N32168.1(NID:g1152567), and genscan [H.sapiens]	1.9	0.0	0.0	0.0	0.0	1.1
AAAGCAGCCA	27526 RIKEN cDNA 2610011N19 gene	1.9	0.0	0.0	0.0	0.0	1.1
TTCTACGTCC	27793 ESTs	1.9	0.0	0.0	0.0	0.0	1.1
AGCTGCTGCT	28017 ESTs, Moderately  similar to HYPOTHETICAL TRP-ASP REPEATS CONTAINING PROTEIN C29E6.01 IN CHROMOSOME I [Schizosaccharomyces pombe] 28719 RIKEN cDNA 2700038M07 gene	1.9	0.0	0.0	0.0	0.0	1.1
CACCTTTTTT	28483 ESTs, Weakly similar to similar to human bromodomain protein BR140(JC2069) [H.sapiens]	1.9	0.0	0.0	0.0	0.0	1.1
ATTCCCATTT	2858 septin 7 41787 expressed in non-metastatic cells 4, protein (NM23-M4)(nucleoside diphosphate kinase)	1.9	0.0	0.0	0.0	0.0	1.1
TCAGCGCTCT	28782 B-cell leukemia/lymphoma 10	1.9	0.0	0.0	0.0	0.0	1.1
CTGGGGTTGG	28991 RIKEN cDNA 1810057I13 gene 30232 DNA segment, Chr 9, Brigham & Women's Genetics 1455 expressed	1.9	0.0	0.0	0.0	0.0	1.1
TTTTGTTTTA	2924 platelet derived growth factor receptor, alpha polypeptide	1.9	0.0	0.0	0.0	0.0	1.1
GCATCCAGGG	29343 RIKEN cDNA 2610524D08 gene	1.9	0.0	0.0	0.0	0.0	1.1
AAGCTGAGAG	29407 ESTs	1.9	0.0	0.0	0.0	0.0	1.1
ATCTCCCAAA	30019 ESTs, Weakly similar to CARG-BINDING FACTOR-A [Mus musculus] 7086 RIKEN cDNA 4931426K16 gene	1.9	0.0	0.0	0.0	0.0	1.1
TGGCTACTGG	30096 RIKEN cDNA 2410030K01 gene	1.9	0.0	0.0	0.0	0.0	1.1
CAAACCATAC	31542 RIKEN cDNA 2900041I18 gene	1.9	0.0	0.0	0.0	0.0	1.1
ATCTACCCAC	34087 ESTs, Weakly similar to A55817 cyclin-dependent kinase p130-PITSLRE - mouse [M.musculus]	1.9	0.0	0.0	0.0	0.0	1.1
ATACTGACGT	34102 ornithine decarboxylase, structural	1.9	0.0	0.0	0.0	0.0	1.1
TGCGTGTGTG	35691 ESTs 46746 RIKEN cDNA 2010306G19 gene	1.9	0.0	0.0	0.0	0.0	1.1
CCACTGCGGA	35738 catenin src 972 RIKEN cDNA 1110032G10 gene	1.9	0.0	0.0	0.0	0.0	1.1
GAAGGGATGT	35796 ecotropic viral integration site 5 44637 RIKEN cDNA 4933426K21 gene	1.9	0.0	0.0	0.0	0.0	1.1
TAATAGGCTT	36034 ESTs	1.9	0.0	0.0	0.0	0.0	1.1
GGCCCCAGGG	37319 ESTs	1.9	0.0	0.0	0.0	0.0	1.1
CTGCTGGGCT	38526 ESTs	1.9	0.0	0.0	0.0	0.0	1.1
TGTGCTTTGG	39103 l-gicerin protein	1.9	0.0	0.0	0.0	0.0	1.1
GCCCAGGGTT	39110 ESTs	1.9	0.0	0.0	0.0	0.0	1.1
GCCCCCAAGG	39543 EST	1.9	0.0	0.0	0.0	0.0	1.1
TGGTCTGAAG	3968 mitogen activated protein kinase kinase kinase 7	1.9	0.0	0.0	0.0	0.0	1.1
AACCTGGACA	41419 ESTs	1.9	0.0	0.0	0.0	0.0	1.1
GGCTCCAAGC	41557 RIKEN cDNA 2810019K23 gene	1.9	0.0	0.0	0.0	0.0	1.1
TGTTTGATAT	41800 ESTs, Highly similar to putative G-binding protein [H.sapiens]	1.9	0.0	0.0	0.0	0.0	1.1
CTGCCAGCAG	42255 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 61326 EST 9558 Pax transcription activation domain interacting protein	1.9	0.0	0.0	0.0	0.0	1.1
CTTTCCCATA	4597 PCTAIRE-motif protein kinase 1	1.9	0.0	0.0	0.0	0.0	1.1
AGGCAAGACA	4888 RAD50 homolog (S. cerevisiae)	1.9	0.0	0.0	0.0	0.0	1.1
TGCATTATGT	51937 RIKEN cDNA 3830418C19 gene	1.9	0.0	0.0	0.0	0.0	1.1
GCCCCAGAAA	53904 ESTs	1.9	0.0	0.0	0.0	0.0	1.1
CCTTCTTTTT	57123 RIKEN cDNA 4921540P06 gene	1.9	0.0	0.0	0.0	0.0	1.1
CTGCTGACTG	636 selenium binding protein 1	1.9	0.0	0.0	0.0	0.0	1.1
ATTGGCAGGA	68617 RIKEN cDNA 4631423F02 gene	1.9	0.0	0.0	0.0	0.0	1.1
TCGATGTGGC	7526 CUG triplet repeat, RNA binding protein 1	1.9	0.0	0.0	0.0	0.0	1.1
CGCTTTAGGT	7634 lymphoid blast crisis-like 1	1.9	0.0	0.0	0.0	0.0	1.1
GCTCATTCCC	8766 RIKEN cDNA 2410004H05 gene	1.9	0.0	0.0	0.0	0.0	1.1
GAGCCCCTGG	9286 RAD51 like 3 (S. cerevisiae)	1.9	0.0	0.0	0.0	0.0	1.1
AACTACCACC		1.9	0.0	0.0	0.0	0.0	1.1
AAGCCCTGCA		1.9	0.0	0.0	0.0	0.0	1.1
AATGGGTGTT		1.9	0.0	0.0	0.0	0.0	1.1
ACAGAGGAGG		1.9	0.0	0.0	0.0	0.0	1.1
ACGACTGATA		1.9	0.0	0.0	0.0	0.0	1.1
ACGGCTAGGG		1.9	0.0	0.0	0.0	0.0	1.1
AGACTTCTGG		1.9	0.0	0.0	0.0	0.0	1.1
AGCTGGTGTT		1.9	0.0	0.0	0.0	0.0	1.1
AGGCCGACAG		1.9	0.0	0.0	0.0	0.0	1.1
ATCTCTGGGA		1.9	0.0	0.0	0.0	0.0	1.1
ATGGCAGCAG		1.9	0.0	0.0	0.0	0.0	1.1
CAACAGCAGC		1.9	0.0	0.0	0.0	0.0	1.1
CAAGAAGGCG		1.9	0.0	0.0	0.0	0.0	1.1
CAAGCACTGT		1.9	0.0	0.0	0.0	0.0	1.1
CACGTGGTGC		1.9	0.0	0.0	0.0	0.0	1.1
CACTCAGTAT		1.9	0.0	0.0	0.0	0.0	1.1
CAGAACCGAC		1.9	0.0	0.0	0.0	0.0	1.1
CAGCTGGTAG		1.9	0.0	0.0	0.0	0.0	1.1
CAGGCCAGAG		1.9	0.0	0.0	0.0	0.0	1.1
CAGGTTGAGG		1.9	0.0	0.0	0.0	0.0	1.1
CAGTCCATTC		1.9	0.0	0.0	0.0	0.0	1.1
CCAGCATTTG		1.9	0.0	0.0	0.0	0.0	1.1
CCCAGAGACA		1.9	0.0	0.0	0.0	0.0	1.1
CCCAGCTTAA		1.9	0.0	0.0	0.0	0.0	1.1
CCCCCCCTCC		1.9	0.0	0.0	0.0	0.0	1.1
CCCTGCCTGC		1.9	0.0	0.0	0.0	0.0	1.1
CCGAAGCTCA		1.9	0.0	0.0	0.0	0.0	1.1
CCTCCGTAGT		1.9	0.0	0.0	0.0	0.0	1.1
CCTGGGCTGG		1.9	0.0	0.0	0.0	0.0	1.1
CCTTCTCTGG		1.9	0.0	0.0	0.0	0.0	1.1
CGCTTGAAGC		1.9	0.0	0.0	0.0	0.0	1.1
CGGGGCGAGC		1.9	0.0	0.0	0.0	0.0	1.1
CGGGTTGTCT		1.9	0.0	0.0	0.0	0.0	1.1
CGTGCAGGCA		1.9	0.0	0.0	0.0	0.0	1.1
CTACCAGGAA		1.9	0.0	0.0	0.0	0.0	1.1
CTCAGCTCGA		1.9	0.0	0.0	0.0	0.0	1.1
CTGACAGGAG		1.9	0.0	0.0	0.0	0.0	1.1
GAGCACCACA		1.9	0.0	0.0	0.0	0.0	1.1
GAGCCAGAGC		1.9	0.0	0.0	0.0	0.0	1.1
GAGTGGCAAC		1.9	0.0	0.0	0.0	0.0	1.1
GCAACAACTG		1.9	0.0	0.0	0.0	0.0	1.1
GCAGATGACA		1.9	0.0	0.0	0.0	0.0	1.1
GCAGATGACT		1.9	0.0	0.0	0.0	0.0	1.1
GCCACTGCAG		1.9	0.0	0.0	0.0	0.0	1.1
GCCCCTGCAC		1.9	0.0	0.0	0.0	0.0	1.1
GCCTGACAAG		1.9	0.0	0.0	0.0	0.0	1.1
GCGGCTGCGG		1.9	0.0	0.0	0.0	0.0	1.1
GCTCCCAAGG		1.9	0.0	0.0	0.0	0.0	1.1
GCTCTGGGCT		1.9	0.0	0.0	0.0	0.0	1.1
GCTGCAGATG		1.9	0.0	0.0	0.0	0.0	1.1
GCTGTCTTTA		1.9	0.0	0.0	0.0	0.0	1.1
GGAGGCCCTG		1.9	0.0	0.0	0.0	0.0	1.1
GGATGTACAA		1.9	0.0	0.0	0.0	0.0	1.1
GGCACAGGGG		1.9	0.0	0.0	0.0	0.0	1.1
GGCATATGCG		1.9	0.0	0.0	0.0	0.0	1.1
GGCTCACCTC		1.9	0.0	0.0	0.0	0.0	1.1
GTAAACACTC		1.9	0.0	0.0	0.0	0.0	1.1
GTACACAGGC		1.9	0.0	0.0	0.0	0.0	1.1
GTCAGTGAGT		1.9	0.0	0.0	0.0	0.0	1.1
GTCTTGCAAG		1.9	0.0	0.0	0.0	0.0	1.1
GTGACCTCAC		1.9	0.0	0.0	0.0	0.0	1.1
GTGCTAGAGG		1.9	0.0	0.0	0.0	0.0	1.1
GTGGCGCAAG		1.9	0.0	0.0	0.0	0.0	1.1
GTGGTGCATT		1.9	0.0	0.0	0.0	0.0	1.1
TAAAGGACAG		1.9	0.0	0.0	0.0	0.0	1.1
TACTGCTTTC		1.9	0.0	0.0	0.0	0.0	1.1
TAGCGGAGCA		1.9	0.0	0.0	0.0	0.0	1.1
TCCACTTCTT		1.9	0.0	0.0	0.0	0.0	1.1
TCCCCGGAAG		1.9	0.0	0.0	0.0	0.0	1.1
TCTGTGTTAA		1.9	0.0	0.0	0.0	0.0	1.1
TGACACACAA		1.9	0.0	0.0	0.0	0.0	1.1
TGACGAGCAC		1.9	0.0	0.0	0.0	0.0	1.1
TGCCACAGTG		1.9	0.0	0.0	0.0	0.0	1.1
TGGCCAGGCT		1.9	0.0	0.0	0.0	0.0	1.1
TGGGAGCAAC		1.9	0.0	0.0	0.0	0.0	1.1
TTAACCATCT		1.9	0.0	0.0	0.0	0.0	1.1
TTAACGTTTT		1.9	0.0	0.0	0.0	0.0	1.1
TTACCCAGGC		1.9	0.0	0.0	0.0	0.0	1.1
TTACTGCTCA		1.9	0.0	0.0	0.0	0.0	1.1
TTTAGAAGCA		1.9	0.0	0.0	0.0	0.0	1.1
ACCAATGAAC	150211 ESTs 22575 Mus musculus ORF1 for hypothetical protein, clone 424981 4962 tumor differentially expressed 1	0.0	457.2	0.0	5.3	25.5	5.3
GCTTCGTCCA	2992 myelin basic protein	0.0	219.2	1.0	0.0	1.0	0.0
GCCACTGCCA	16745 oxytocin	0.0	145.4	0.0	0.0	1.0	0.0
GTGACCTGGC	1008 prostaglandin D2 synthase (21 kDa, brain)	0.0	136.5	3.1	6.3	3.1	2.1
GCTTTCTTAC	26743 apolipoprotein A-I 606 GATA-binding protein 3	0.0	126.5	0.0	4.2	15.3	2.1
GGGTTGGGGA		0.0	111.6	0.0	0.0	1.0	17.9
TATGCAACCC	7089 necdin	0.0	107.6	25.5	51.8	19.3	5.3
GGAAGATGCT	94160 brain expressed X-linked 2	0.0	67.7	20.4	36.0	15.3	5.3
TCTGATGGAA	27768 RIKEN cDNA 6330403K07 gene	0.0	64.8	4.1	7.4	1.0	1.1
CTGAGGAAGT	29027 SPARC-like 1 (mast9, hevin)	0.0	63.8	16.3	15.9	13.2	3.2
TATATTAAAT	4435 synaptosomal-associated protein, 25 kDa	0.0	60.8	19.4	11.6	10.2	9.5
TAATTATTGG		0.0	60.8	7.2	2.1	4.1	4.2
AAATCTTCTG		0.0	60.8	0.0	0.0	0.0	0.0
CCGGCGTGGA	43499 DNA segment, Chr 10, Brigham & Women's Genetics 0738 expressed	0.0	57.8	15.3	21.1	1.0	1.1
GAAATATATG	2966 isocitrate dehydrogenase 2 (NADP+), mitochondrial 569 voltage-dependent anion channel 2	0.0	54.8	23.5	23.3	5.1	14.7
TCTTAATGAA	16323 eukaryotic translation initiation factor 4A2	0.0	54.8	17.4	15.9	9.2	17.9
GCGCCAGCTC	29807 ubiquitin carboxy-terminal hydrolase L1	0.0	54.8	9.2	9.5	11.2	0.0
AAGAGAAACC	170505 RIKEN cDNA 2610102M01 gene 21707 RIKEN cDNA 1110021N07 gene 5023 Purkinje cell protein 4	0.0	53.8	27.6	19.0	13.2	3.2
CGCAGCGTTG	5259 ESTs	0.0	51.8	0.0	0.0	0.0	0.0
TGATATGAGC	9745 lactate dehydrogenase 2, B chain	0.0	48.8	27.6	6.3	13.2	4.2
GACACTCAAT	43678 ESTs	0.0	48.8	17.4	63.4	28.5	45.3
AATAAAGCCA	38495 DNA segment, Chr 15, ERATO Doi 412, expressed 44123 DNA segment, Chr 8, ERATO Doi 713, expressed	0.0	46.8	50.1	31.7	34.6	22.1
CCTTACCGCT	4086 Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900084A04, full insert sequence	0.0	46.8	37.8	27.5	44.8	4.2
ATTGGCCCCA	26633 PH domain containing protein in retina 1	0.0	46.8	25.5	116.3	68.2	45.3
AGAGTAATCA	1222 growth associated protein 43	0.0	46.8	0.0	5.3	0.0	0.0
TTGGACTGAG	30017 RIKEN cDNA 0610012F20 gene	0.0	45.8	24.5	32.8	13.2	4.2
TGGGCATCCA	3229 ribosomal protein L26	0.0	42.8	39.8	48.6	37.7	27.4
TGTATAAAAA	4526 tumor rejection antigen gp96	0.0	42.8	17.4	29.6	11.2	14.7
TTGACTTTAT	29075 RIKEN cDNA 0710005K15 gene 42230 cytochrome P450, 26, retinoic acid	0.0	41.8	8.2	8.5	5.1	6.3
TAAGGGAAAT	4222 triosephosphate isomerase	0.0	40.8	34.7	52.9	17.3	13.7
CATCGCCAGT	138866 apolipoprotein E	0.0	39.8	32.7	16.9	23.4	3.2
AAGTCATTCT	27448 neuropilin	0.0	38.9	0.0	2.1	2.0	11.6
TGGTTGGGGA	169920 ESTs	0.0	38.9	0.0	0.0	0.0	0.0
TAATAGTAAC	360 cytochrome c oxidase, subunit Va	0.0	37.9	8.2	7.4	6.1	7.4
TTGGCAAGTC	33989 RIKEN cDNA A230109K23 gene	0.0	37.9	0.0	0.0	0.0	0.0
TTGGTCAAAC	180937 DNA segment, Chr 9, Brigham & Women's Genetics 0185 expressed	0.0	36.9	10.2	11.6	6.1	3.2
GAAAAAAAAA	23974 Mus musculus, clone MGC:7427, mRNA, complete cds 23547 Mus musculus male meiosis specific protein Tcte2 (Tcte2) mRNA, complete cds 2981 vaccinia related kinase 1 31400 RIKEN cDNA 5730512J02 gene 34345 fatty acid desaturase 3 8008 cone-rod homeobox containing gene	0.0	36.9	9.2	23.3	9.2	13.7
GAAAATAAAC	181870 RIKEN cDNA 1700034P14 gene 6190 arginine vasopressin	0.0	36.9	1.0	2.1	0.0	1.1
AATTAGCAGT		0.0	35.9	0.0	0.0	1.0	0.0
AATTCGCGGA	2108 transthyretin	0.0	34.9	18.4	1.1	2.0	1.1
TTGATTTTTT	41926 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 (9 kDa, MLRQ) 69751 peptidase 4	0.0	34.9	15.3	14.8	14.3	11.6
TCATTATGAT	21868 RIKEN cDNA 1200013E08 gene	0.0	34.9	6.1	5.3	5.1	3.2
TCAGAGGCCT	22801 ESTs	0.0	34.9	5.1	27.5	13.2	1.1
AATTAGTTGT	353 ATP synthase, H+ transporting, mitochondrial F0 complex subunit F	0.0	32.9	51.1	12.7	9.2	17.9
TGGACCTTTT	7729 aldolase 3, C isoform	0.0	32.9	5.1	7.4	25.5	7.4
TCTCCAGGCG	142594 clusterin	0.0	31.9	16.3	7.4	24.4	4.2
TTCTAGCATA	4550 ATPase, Na+/K+ transporting, beta 1 polypeptide	0.0	31.9	13.3	11.6	18.3	4.2
GTGATGCAAG	30214 RIKEN cDNA 0610006O14 gene	0.0	30.9	21.5	41.2	19.3	27.4
AACCCTAATA		0.0	30.9	0.0	1.1	4.1	12.6
TAAGTGGAAT	3360 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	0.0	29.9	27.6	10.6	4.1	8.4
GGCTGATTAG		0.0	29.9	1.0	1.1	1.0	0.0
GAAATTTATT		0.0	29.9	0.0	1.1	4.1	8.4
TTTCAGCAAA	18675 hypoxanthine guanine phosphoribosyl transferase 25824 EST 40038 RIKEN cDNA 2810401C16 gene 42094 neuroendocrine-specific Golgi protein p55 isoform 1	0.0	29.9	0.0	1.1	4.1	2.1
CAGCCACACG	43587 hippocalcin 87684 RIKEN cDNA 2610028L16 gene	0.0	28.9	16.3	21.1	8.1	1.1
ACCAATGAAA	35474 leukemia-associated gene-like	0.0	28.9	11.2	7.4	4.1	1.1
TGGATCCTGA	142368 hemoglobin, beta adult major chain 154896 hemoglobin, beta adult minor chain 182956 hemoglobin beta chain complex 35830 hemoglobin Y, beta-like embryonic chain 4284 guanine nucleotide binding protein, alpha inhibiting 2	0.0	27.9	55.2	16.9	4.1	1.1
GAAAGCAATG	102425 ESTs 29835 DNA segment, Chr 19, Wayne State University 55, expressed 90787 brain expressed X-linked 3	0.0	26.9	17.4	24.3	5.1	3.2
GAGTGCTTTG	178672 Mus musculus 18 days embryo cDNA, RIKEN full-length enriched library, clone:1110004H09, full insert sequence	0.0	26.9	14.3	20.1	14.3	0.0
AAATAAAACA	165874 ESTs 182042 RIKEN cDNA 0610009D10 gene	0.0	26.9	14.3	11.6	2.0	17.9
TATGAATTAA	889 RAS-related C3 botulinum substrate 1	0.0	26.9	1.0	5.3	0.0	1.1
AACTTGATTA	27886 RIKEN cDNA 2410011G03 gene	0.0	26.9	1.0	0.0	5.1	8.4
AAATTATTGG	1268 proteolipid protein (myelin)	0.0	26.9	0.0	0.0	0.0	0.0
TAACTTTAAG	43278 olfactomedin related ER localized protein	0.0	25.9	20.4	4.2	2.0	3.2
GGGGTTGGGG	153895 ESTs 28768 prostaglandin E synthase 41702 RIKEN cDNA 6230403H02 gene	0.0	25.9	0.0	1.1	1.0	9.5
GAATTAACAT	42972 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	0.0	24.9	23.5	23.3	9.2	21.1
TATTTTGTTT	648 prion protein	0.0	24.9	15.3	7.4	12.2	13.7
TATTAATAAA	18590 transmembrane 4 superfamily member 2	0.0	24.9	5.1	5.3	2.0	8.4
GGGGGAGTGG	140956 neuronatin	0.0	23.9	11.2	8.5	1.0	0.0
TAATAAATAA	34105 RIKEN cDNA 2010110K24 gene 87320 RIKEN cDNA 4921510J17 gene	0.0	23.9	6.1	8.5	3.1	12.6
CAGTTATAAA	4266 integral membrane protein 2 B	0.0	23.9	6.1	6.3	6.1	4.2
ACCAAAAAAA	28813 EST AI462012	0.0	23.9	0.0	2.1	4.1	1.1
TCCTGAAATA	27756 ESTs	0.0	22.9	12.3	15.9	4.1	1.1
GGGAAAAAAA	16080 dynamin	0.0	22.9	6.1	12.7	19.3	16.9
TGTTCACTAA	3093 serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	0.0	22.9	0.0	4.2	1.0	0.0
GGCCGCTGCT	142697 RIKEN cDNA 1110063J16 gene	0.0	21.9	28.6	57.1	15.3	6.3
GGAAGATCCG	181066 reduced expression 3	0.0	21.9	11.2	9.5	7.1	0.0
CAAAAAAAAA	155738 ESTs 23020 potassium channel, subfamily K, member 8 41615 RIKEN cDNA 2810454P21 gene 55143 dickkopf homolog 3 (Xenopus laevis)	0.0	21.9	7.2	18.0	11.2	9.5
TAGACAAAGG	5258 DNA segment, Chr 10, Brigham & Women's Genetics 0447 expressed 64982 RIKEN cDNA 4930471O16 gene	0.0	21.9	7.2	11.6	7.1	4.2
TTAATATTTA	27570 RIKEN cDNA 2700038D15 gene 3157 fibroblast growth factor receptor 1	0.0	21.9	7.2	5.3	2.0	9.5
GAACGGGGAA	2108 transthyretin	0.0	21.9	1.0	0.0	0.0	0.0
ATGAGAACAG	34344 RIKEN cDNA 3000003F02 gene	0.0	21.9	0.0	1.1	2.0	3.2
TAGATCCTAG	30113 RIKEN cDNA 0610010M09 gene	0.0	20.9	19.4	10.6	2.0	5.3
AAAGCAAAGC	163761 ESTs 29101 RIKEN cDNA 2410004M09 gene	0.0	20.9	12.3	23.3	3.1	4.2
CCAAAAAAAA	18946 adaptor protein complex AP-2, mu1 33304 ESTs 4557 Tousled-like kinase 2 (Arabidopsis) 89373 ESTs	0.0	20.9	8.2	21.1	19.3	4.2
TGGGTTTAGA	158069 hypoxia induced gene 1 7381 RIKEN cDNA 2210020B17 gene	0.0	20.9	5.1	13.7	13.2	6.3
TAATATTTAA	27005 visinin-like 1	0.0	20.9	1.0	3.2	0.0	0.0
AGATTACTGT	25552 ESTs, Weakly similar to AF198489 1 LBP-32 [H.sapiens] 850 signal recognition particle 14 kDa (homologous Alu RNA-binding protein)	0.0	19.9	26.6	10.6	6.1	8.4
TACGTTTCTA	5260 gamma-aminobutyric acid (GABA-A) transporter 1	0.0	19.9	14.3	18.0	7.1	6.3
GGGGCTCACA		0.0	19.9	13.3	9.5	17.3	21.1
TGGTTCTCTG	32716 ESTs, Weakly similar to T00068 hypothetical protein KIAA0443 [H.sapiens]	0.0	19.9	7.2	7.4	3.1	1.1
TGAGAGGGAA	27923 ESTs, Weakly similar to 3BP1 MOUSE SH3-BINDING PROTEIN 3BP-1 [M.musculus]	0.0	19.9	7.2	5.3	2.0	0.0
TGCAATATGG	16323 eukaryotic translation initiation factor 4A2	0.0	19.9	2.0	9.5	2.0	2.1
TAATTTTCCA	4766 vesicular membrain protein p24	0.0	19.9	1.0	1.1	2.0	0.0
GGACCGTACA	1268 proteolipid protein (myelin)	0.0	19.9	0.0	1.1	0.0	0.0
AGTGAGACCA	829 S100 protein, beta polypeptide, neural	0.0	19.9	0.0	0.0	0.0	0.0
AATGTGAGTC	29717 3-monooxgenase/tryptophan 5-monooxgenase activation protein, gamma polypeptide	0.0	18.9	36.8	22.2	6.1	4.2
GGAGCAGGAC	22494 uroporphyrinogen decarboxylase	0.0	18.9	19.4	9.5	3.1	4.2
TATCACTCTG	2395 male enhanced antigen 1	0.0	18.9	6.1	5.3	4.1	2.1
GCAGGTACTG	4263 cystatin C	0.0	18.9	5.1	1.1	0.0	0.0
ATGAGTCTGT	27885 RIKEN cDNA 4931428D14 gene	0.0	18.9	4.1	12.7	11.2	10.5
TGTATCCAGT	41277 hypothetical protein, MNCb-0385	0.0	18.9	3.1	2.1	8.1	1.1
GCGCCCTGAT	44442 RIKEN cDNA 2410012C07 gene	0.0	18.9	3.1	2.1	0.0	1.1
TTCTACGAGT	29924 ADP-ribosylation-like factor 6 interacting protein	0.0	18.9	0.0	0.0	8.1	2.1
TGACCAGCCC	1008 prostaglandin D2 synthase (21 kDa, brain) 158416 RIKEN cDNA 5730492I20 gene	0.0	18.9	0.0	0.0	0.0	0.0
CATCCTTGAT	16831 creatine kinase, brain	0.0	17.9	61.3	57.1	68.2	41.1
TAGATGTTGC	41813 ESTs	0.0	17.9	14.3	14.8	2.0	0.0
GCAGAGTTTT	4560 low density lipoprotein receptor related protein, associated protein 1	0.0	17.9	6.1	13.7	6.1	0.0
GAGTTCTCTG	29455 RIKEN cDNA 1810045K07 gene	0.0	17.9	5.1	10.6	10.2	6.3
CCACCATTGT	126793 ESTs	0.0	17.9	2.0	4.2	5.1	0.0
TAGGAGACTG	2314 protein kinase C, delta	0.0	17.9	1.0	1.1	2.0	0.0
GATTGTCAAA	28480 FK506-binding protein 3 (25kD)	0.0	17.9	0.0	9.5	2.0	5.3
TGTACTTGAA	38421 ESTs	0.0	17.9	0.0	0.0	1.0	0.0
AGTGGGGGTG	29075 RIKEN cDNA 0710005K15 gene	0.0	16.9	24.5	10.6	9.2	1.1
TTGTTCTGAC	589 glucose phosphate isomerase 1 complex	0.0	16.9	16.3	25.4	20.4	7.4
ACTCCTGTCC	29705 ESTs	0.0	16.9	11.2	8.5	10.2	2.1
TTATGGATCT	30835 ESTs	0.0	16.9	5.1	6.3	2.0	1.1
TGACCATAAC	65407 RIKEN cDNA 2900073D12 gene	0.0	16.9	4.1	3.2	4.1	0.0
AACTATTAAA	27030 protein kinase, cAMP dependent regulatory, type I beta, related sequence	0.0	16.9	2.0	3.2	3.1	0.0
TATTAAATGT	27363 RIKEN cDNA 1110003O22 gene 30109 RIKEN cDNA 1110055L24 gene	0.0	16.9	2.0	2.1	1.0	2.1
GGGCAGGGGA	28643 vesicle-associated membrane protein 2	0.0	16.9	1.0	1.1	4.1	0.0
TCTTTGGAAC	21743 malate dehydrogenase, mitochondrial	0.0	15.9	40.9	13.7	14.3	6.3
CAACAAAACC	235 ubiquitin B	0.0	15.9	18.4	4.2	3.1	0.0
GCAAGAGAGA	2338 glutamine synthetase	0.0	15.9	16.3	11.6	19.3	2.1
GTGCTTTCAA	154560 maternally expressed gene 3	0.0	15.9	14.3	28.5	13.2	2.1
TCAATAAAGC	45097 ESTs 6478 ESTs, Highly similar to protein associated with Myc [H.sapiens]	0.0	15.9	10.2	13.7	7.1	3.2
ACGGGCAAAA	181430 dynein, cytoplasmic, heavy chain 1	0.0	15.9	6.1	14.8	7.1	3.2
TGAGTCCACT	40068 RIKEN cDNA 3200002H15 gene	0.0	15.9	4.1	11.6	5.1	0.0
AAACACTGTC	2875 RIKEN cDNA 1100001J13 gene	0.0	15.9	4.1	6.3	6.1	3.2
GGGATGGCCA	41602 RIKEN cDNA 3110050O07 gene	0.0	15.9	4.1	0.0	5.1	0.0
TATGATGAAA	180290 RIKEN cDNA 1500032L24 gene	0.0	15.9	3.1	9.5	6.1	4.2
TTGAAGCTCC	mito Tag matches mitochondrial sequence	0.0	15.9	1.0	2.1	16.3	3.2
GGGTTAATGG	44187 RIKEN cDNA 0610010I06 gene	0.0	15.9	0.0	0.0	0.0	0.0
GGTGTAAACA	4425 claudin 11	0.0	15.9	0.0	0.0	0.0	0.0
TCTGCCCTCT	116284 RIKEN cDNA 4932415G12 gene 20901 peroxisomal biogenesis factor 11b 4870 synaptosomal-associated protein, 91 kDa	0.0	14.9	17.4	23.3	20.4	14.7
CCTTACACTT	3679 tetratricopeptide repeat domain	0.0	14.9	11.2	12.7	8.1	2.1
TAGTAGTGGA	22149 RIKEN cDNA 2310034D06 gene	0.0	14.9	11.2	11.6	6.1	5.3
CTGCTCCGTT	40725 RIKEN cDNA 4933406E20 gene	0.0	14.9	10.2	8.5	6.1	2.1
CAAAATACAT	183129 RIKEN cDNA 2810433C11 gene 27578 RIKEN cDNA 5430405L04 gene 84977 RIKEN cDNA 1700123L14 gene	0.0	14.9	9.2	12.7	1.0	7.4
GTGATGCAAA	30214 RIKEN cDNA 0610006O14 gene	0.0	14.9	7.2	12.7	18.3	11.6
ATTTCAGGTA	42255 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	0.0	14.9	6.1	6.3	2.0	10.5
TAATAAAGTC	9703 ATX1 (antioxidant protein 1) homolog 1 (yeast)	0.0	14.9	5.1	6.3	1.0	4.2
GTAATCTCTG	29330 ESTs	0.0	14.9	3.1	5.3	7.1	2.1
CTGTAAATGT	3380 kinesin family member 5B	0.0	14.9	2.0	12.7	3.1	2.1
ACAGCCCACC	4550 ATPase, Na+/K+ transporting, beta 1 polypeptide	0.0	14.9	1.0	10.6	2.0	0.0
GCAGATGGCA	10800 potassium channel, subfamily K, member 1	0.0	14.9	1.0	7.4	5.1	0.0
ACACTTGTTG	27062 RIKEN cDNA 3110031O14 gene	0.0	13.9	25.5	9.5	4.1	1.1
GGAGGGTTGG	174998 RIKEN cDNA 1110033P22 gene	0.0	13.9	17.4	13.7	6.1	0.0
GAACAGGCAG	25165 ALL1-fused gene from chromosome 1q	0.0	13.9	15.3	7.4	3.1	1.1
CAGATCTTCG	235 ubiquitin B 43005 ubiquitin A-52 residue ribosomal protein fusion product 1	0.0	13.9	11.2	2.1	4.1	0.0
CAGTTGGTTC	41686 ESTs	0.0	13.9	9.2	10.6	2.0	4.2
TAAGTGAAAA	28893 ESTs, Highly similar to AF215923 1 exchange factor smgGDS [H.sapiens]	0.0	13.9	7.2	4.2	3.1	1.1
TTGTGAAATC	41840 protein phospatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)	0.0	13.9	6.1	11.6	4.1	6.3
GTGACTAATG	29131 RIKEN cDNA 1110049F12 gene	0.0	13.9	4.1	10.6	4.1	7.4
GAGAGAAGAG	1287 microtubule-associated protein tau 169999 EST 39082 TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B 41128 RIKEN cDNA 6230401O10 gene	0.0	13.9	4.1	1.1	5.1	0.0
GACTATATAT	1007 proteasome (prosome, macropain) subunit, alpha type 3	0.0	13.9	3.1	5.3	3.1	2.1
GAGTCACTCT	41604 ESTs	0.0	13.9	3.1	1.1	1.0	1.1
AAAAGAAATA	133615 RIKEN cDNA 2810457I06 gene 182114 RIKEN cDNA 2310008D22 gene 2942 asparagine synthetase	0.0	13.9	2.0	3.2	0.0	6.3
AAATAAAGAT	1418 sodium channel, voltage-gated, type I, beta polypeptide	0.0	13.9	2.0	1.1	0.0	0.0
TAAAAAGAAA	26722 N-myc downstream regulated 2	0.0	13.9	2.0	0.0	1.0	2.1
TGCAGAGAAA	687 aplysia ras-related homolog B (RhoB)	0.0	13.9	0.0	4.2	1.0	1.1
CACTTTTTTT	22708 serine (or cysteine) proteinase inhibitor, clade H (heat shock protein 47), member 1	0.0	13.9	0.0	1.1	0.0	0.0
GCGGGGTCGC	4881 granin-like neuroendocrine peptide precursor	0.0	13.9	0.0	0.0	15.3	5.3
ACACCACAGT	41628 ESTs	0.0	13.9	0.0	0.0	2.0	0.0
CAGACTGTTC	4263 cystatin C	0.0	13.9	0.0	0.0	0.0	4.2
GATGACACCA	3458 ribosomal protein S28	0.0	13.0	43.9	26.4	25.5	15.8
TACTGCTGAT	22711 cyclin I	0.0	13.0	16.3	9.5	7.1	6.3
TGGGGTTTCC	3129 syntaxin binding protein 1	0.0	13.0	15.3	21.1	42.8	24.2
TTTAGCTGAC	3035 RIKEN cDNA 3110006P09 gene	0.0	13.0	12.3	14.8	4.1	4.2
GTTAAGTTAA	666 RIKEN cDNA 2310016K22 gene	0.0	13.0	8.2	10.6	2.0	6.3
TTCATTATTG	131168 ESTs 29504 sperm specific antigen 1	0.0	13.0	8.2	3.2	3.1	2.1
CTGGGTAAAG	28662 ESTs, Weakly similar to PRP3 MOUSE PROLINE-RICH PROTEIN MP-3 [M.musculus]	0.0	13.0	6.1	4.2	6.1	3.2
CATACTATAT	23671 RIKEN cDNA 1500031H04 gene	0.0	13.0	4.1	4.2	5.1	1.1
TGATAAAAGT	10288 ATPase, class II, type 9A	0.0	13.0	3.1	9.5	5.1	0.0
GAAAACATTA	29902 ribosomal protein, mitochondrial, S7	0.0	13.0	3.1	2.1	0.0	0.0
CTGGAGATGT	39857 RIKEN cDNA 2900074L19 gene 87602 ESTs, Weakly similar to unnamed protein product [H.sapiens]	0.0	13.0	3.1	2.1	0.0	0.0
AAATAAATGT	1251 myelin-associated glycoprotein 28016 RIKEN cDNA 4731402B04 gene 5181 ring finger protein (C3HC4 type) 19	0.0	13.0	2.0	4.2	2.0	2.1
TAAAAAATAA	33729 RIKEN cDNA 1300006L01 gene 36793 RIKEN cDNA 1110002L01 gene 71 protein kinase, DNA activated, catalytic polypeptide	0.0	13.0	1.0	3.2	1.0	4.2
GCAAACAAGA	2966 isocitrate dehydrogenase 2 (NADP+), mitochondrial	0.0	13.0	0.0	6.3	0.0	1.1
GGACATCTAA	157125 ESTs, Weakly similar to BcDNA.LD28657 [D.melanogaster]	0.0	13.0	0.0	3.2	4.1	1.1
TTAATCCCAA	15711 cyclic nucleotide phosphodiesterase 1	0.0	13.0	0.0	1.1	0.0	0.0
TTGATGTATC	mito Tag matches mitochondrial sequence	0.0	13.0	0.0	0.0	7.1	1.1
GGCCGCCGCG	10096 hypocretin	0.0	13.0	0.0	0.0	0.0	0.0
AATAATTAGC		0.0	13.0	0.0	0.0	0.0	0.0
GCTATAATAA	8911 proteasome (prosome, macropain) subunit, beta type 5	0.0	12.0	22.5	8.5	4.1	7.4
AATAAAAGTT	4069 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1 5885 RIKEN cDNA 1500001N15 gene	0.0	12.0	20.4	22.2	5.1	8.4
TAACCAATCA	29829 RAB5C, member RAS oncogene family	0.0	12.0	17.4	14.8	6.1	9.5
TTTATTTCAT	2469 split hand/foot deleted gene 1	0.0	12.0	14.3	1.1	0.0	2.1
TCACTTTGCC	44107 ESTs	0.0	12.0	13.3	5.3	7.1	1.1
ACACAGAAAT	1444 COP9 (constitutive photomorphogenic), subunit 7a (Arabidopsis) 172849 ESTs, Weakly similar to KIAA0323 [H.sapiens]	0.0	12.0	11.2	3.2	4.1	1.1
TGTGAATGAT	159989 RIKEN cDNA A230104H11 gene 181892 RIKEN cDNA 5230400G24 gene	0.0	12.0	8.2	11.6	3.1	6.3
GATTAAAACA	28286 RIKEN cDNA 4931406I20 gene 46625 ESTs	0.0	12.0	8.2	10.6	10.2	10.5
AATAAAAACT	22470 RIKEN cDNA 1110030M22 gene	0.0	12.0	8.2	10.6	3.1	11.6
GAAGGTGTAT	27901 RIKEN cDNA 1110020J08 gene	0.0	12.0	7.2	13.7	6.1	4.2
CGATCCCCTT	259 RIKEN cDNA 2810405M13 gene	0.0	12.0	7.2	10.6	9.2	3.2
TATGAGATAG	28996 translocase of inner mitochondrial membrane 10 homolog (yeast)	0.0	12.0	7.2	4.2	2.0	2.1
GCACGACCTG		0.0	12.0	5.1	29.6	7.1	3.2
AGCTCATCAT		0.0	12.0	5.1	4.2	6.1	1.1
GCTATGAGAA	2381 amyloid beta (A4) precursor-like protein 1	0.0	12.0	4.1	4.2	5.1	0.0
AACGGTGTAT	41737 RIKEN cDNA 1110003P13 gene	0.0	12.0	4.1	3.2	1.0	3.2
GGTTTTCAAG	7353 ubiquitin-like 1	0.0	12.0	3.1	5.3	1.0	1.1
TGCTGAGATC	154560 maternally expressed gene 3	0.0	12.0	2.0	6.3	1.0	0.0
TAAAGCAAAA	21579 RIKEN cDNA 2610022J01 gene	0.0	12.0	2.0	5.3	17.3	14.7
GTATACTGTA	41605 RIKEN cDNA 1100001D19 gene	0.0	12.0	2.0	4.2	0.0	1.1
ATCTAGGAGG		0.0	12.0	1.0	5.3	5.1	1.1
GGGCTCCAAC		0.0	12.0	1.0	2.1	0.0	2.1
CCCTTCTTCT	142368 hemoglobin, beta adult major chain 179377 hemoglobin alpha, adult chain 1	0.0	12.0	0.0	10.6	3.1	0.0
TGTAATTTTA	93738 ESTs	0.0	12.0	0.0	2.1	0.0	0.0
GGCAGTTACG		0.0	12.0	0.0	1.1	4.1	0.0
GTGTGAAGTT	27971 ESTs, Weakly similar to LIM PROTEIN RIL [Rattus norvegicus]	0.0	12.0	0.0	0.0	1.0	0.0
GGCAAGGTCG	2992 myelin basic protein	0.0	12.0	0.0	0.0	0.0	0.0
TAAACCAAAA	4517 inter-alpha trypsin inhibitor, heavy chain 3	0.0	12.0	0.0	0.0	0.0	0.0
CCCCCAATTC	28643 vesicle-associated membrane protein 2	0.0	11.0	31.7	33.8	32.6	7.4
GTGTTGTCGG	954 ESTs, Weakly similar to S1-1 protein [R.norvegicus]	0.0	11.0	18.4	13.7	4.1	3.2
TCAGTTTATT	4962 tumor differentially expressed 1	0.0	11.0	17.4	4.2	3.1	6.3
GCAATAATGG	153383 ESTs, Highly similar to similar to Yeast translation activator GCN1 [H.sapiens] 34074 RIKEN cDNA 2310040A07 gene	0.0	11.0	10.2	4.2	6.1	0.0
TTAAAAAAAA	104920 sorbitol dehydrogenase 1 6562 sulfotransferase-related protein SULT-X1 6678 protein tyrosine phosphatase, non-receptor type 9	0.0	11.0	7.2	3.2	4.1	4.2
CCCACTGCCT	25738 ESTs	0.0	11.0	6.1	7.4	3.1	1.1
ACATTTCAAT	14638 RIKEN cDNA 9130422N19 gene 179007 RIKEN cDNA 3110025G09 gene 4093 topoisomerase (DNA) II beta	0.0	11.0	6.1	7.4	1.0	11.6
ATGATGGACA	30049 complement component 1, q subcomponent binding protein	0.0	11.0	6.1	5.3	3.1	2.1
TTGTTGTTGA	18041 calmodulin 2	0.0	11.0	6.1	4.2	1.0	0.0
CCAGGTTATT	27858 RIKEN cDNA 1110036B12 gene	0.0	11.0	5.1	8.5	2.0	0.0
GACTGATCTT	41743 ESTs, Moderately similar to AF151807 1 CGI-49 protein [H.sapiens]	0.0	11.0	5.1	6.3	1.0	0.0
CTCAGAGGTC	142334 p21 (CDKN1A)-activated kinase 1	0.0	11.0	5.1	0.0	3.1	0.0
AAATAAAGCT	86682 ESTs 86933 ESTs, Weakly similar to Edp1 protein [M.musculus]	0.0	11.0	4.1	7.4	0.0	3.2
TTGGGATGTT	20964 guanine nucleotide binding protein, alpha o	0.0	11.0	4.1	2.1	10.2	2.1
TGGTTGTTGG		0.0	11.0	4.1	2.1	4.1	6.3
AGGAACCAAA	4435 synaptosomal-associated protein, 25 kDa	0.0	11.0	3.1	4.2	15.3	10.5
TGGGTTGTTT	254 translationally regulated transcript (21 kDa)	0.0	11.0	3.1	3.2	1.0	1.1
TGTTCCAGAT	354 calbindin-28K	0.0	11.0	3.1	2.1	5.1	3.2
GTATTTAACA	23943 vesicle-associated membrane protein, associated protein A (33 kDa)	0.0	11.0	3.1	2.1	1.0	3.2
CAACACACAA	153783 pantophysin	0.0	11.0	3.1	1.1	9.2	0.0
TAAACCACTG	101478 ESTs 340 high mobility group box 3	0.0	11.0	2.0	1.1	2.0	0.0
TTTATGGAAT	27491 mitogen activated protein kinase kinase 4	0.0	11.0	2.0	0.0	0.0	0.0
GAAGTCAAAA	31895 ESTs 40563 ESTs	0.0	11.0	1.0	7.4	1.0	3.2
ATGATAATGG	154012 RIKEN cDNA 0610010A22 gene 158759 RIKEN cDNA 3200001D21 gene 175028 RIKEN cDNA 0610008K04 gene	0.0	11.0	1.0	2.1	5.1	6.3
CCTGGGACAC	2918 megakaryocyte-associated tyrosine kinase	0.0	11.0	1.0	0.0	4.1	0.0
TGCTTAACGA	11819 RIKEN cDNA 1500015O10 gene	0.0	11.0	1.0	0.0	0.0	0.0
TGCACAGCTT		0.0	11.0	1.0	0.0	0.0	0.0
CCAACCGTCT	27435 organic cation transporter	0.0	11.0	0.0	1.1	8.1	0.0
TGTTCTTCCC	34855 ESTs	0.0	11.0	0.0	0.0	0.0	0.0
TTGGCCTGAC	5023 Purkinje cell protein 4	0.0	11.0	0.0	0.0	0.0	0.0
GGCAGACTGT	122087 ESTs	0.0	10.0	66.4	49.7	67.2	32.7
ATGACAAAGA	40684 ESTs	0.0	10.0	52.1	16.9	3.1	0.0
GCTGCCAGCA	29383 ESTs, Highly  similar to TRANSLATION INITIATION FACTOR EIF-2B-EPSILON SUBUNIT [Oryctolagus cuniculus]	0.0	10.0	17.4	1.1	0.0	0.0
ATTTGATTAG	182471 RIKEN cDNA 2610524G07 gene	0.0	10.0	16.3	15.9	14.3	7.4
TGTGGAAAGA	14455 transforming growth factor, beta induced, 68 kDa 168350 ESTs 43278 olfactomedin related ER localized protein	0.0	10.0	16.3	6.3	3.1	0.0
TTAGGCAAGT	3360 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	0.0	10.0	14.3	4.2	7.1	3.2
CGTCTGGAGT	23916 RIKEN cDNA 2310043K02 gene	0.0	10.0	12.3	15.9	8.1	5.3
GCCTTTTGTT	133962 voltage-dependent anion channel 3	0.0	10.0	12.3	9.5	4.1	4.2
CCTGTGGGTC	29896 ribosomal protein L21	0.0	10.0	11.2	2.1	9.2	1.1
GAGATAATTT	140013 RIKEN cDNA 6330417M19 gene	0.0	10.0	9.2	6.3	3.1	0.0
GACATTGATT	42949 RIKEN cDNA 1110012O05 gene	0.0	10.0	9.2	5.3	7.1	1.1
TGTTTTCTAC	22086 ring finger protein 14	0.0	10.0	8.2	4.2	5.1	6.3
CTAAGTAAAA	139239 RIKEN cDNA 2900016C05 gene 36753 RIKEN cDNA 2610043A19 gene	0.0	10.0	7.2	2.1	2.0	0.0
TCTACACATA	2576 RIKEN cDNA 0610006G08 gene	0.0	10.0	7.2	1.1	4.1	2.1
TTGTCACATC	26680 ESTs	0.0	10.0	7.2	0.0	3.1	0.0
CATTACTGTC	39281 RIKEN cDNA 5830498C14 gene	0.0	10.0	6.1	12.7	10.2	2.1
TAAATTCACA	24463 RIKEN cDNA 2610044B22 gene	0.0	10.0	6.1	8.5	3.1	4.2
CTAGACAGAG		0.0	10.0	5.1	6.3	2.0	8.4
GTATTTGCAA	41603 ESTs	0.0	10.0	5.1	3.2	1.0	5.3
CAATCGTGAC	45755 RIKEN cDNA 1500031O19 gene	0.0	10.0	4.1	6.3	2.0	3.2
CAACTGTATT	30065 RIKEN cDNA 5031409G22 gene	0.0	10.0	4.1	5.3	3.1	8.4
ACAAAATAAA	159222 RIKEN cDNA 5430421F17 gene 6743 nuclear factor, erythroid derived 2,-like 1	0.0	10.0	4.1	4.2	0.0	1.1
TCTCACTGTA	92496 ESTs	0.0	10.0	4.1	2.1	1.0	1.1
AGACAAAGTT	1032 heat shock protein, 110 kDa 30652 ESTs	0.0	10.0	3.1	7.4	3.1	3.2
TGCATAATCA	178974 RIKEN cDNA 1500001M02 gene	0.0	10.0	3.1	6.3	8.1	5.3
CTGCATTAAG	2733 AU RNA-binding protein/enoyl-coenzyme A hydratase	0.0	10.0	3.1	6.3	1.0	4.2
ATAGCCCCAA	3619 cathepsin S	0.0	10.0	3.1	3.2	0.0	0.0
ATGCCTCCAG	4550 ATPase, Na+/K+ transporting, beta 1 polypeptide	0.0	10.0	3.1	2.1	2.0	0.0
TAAGAATAGC	20938 WW domain binding protein 4	0.0	10.0	3.1	1.1	3.1	2.1
GAAATGTTGT	22117 RIKEN cDNA 2410046K11 gene	0.0	10.0	2.0	7.4	2.0	2.1
GAGACCAGGT	28752 RIKEN cDNA 2010107G23 gene	0.0	10.0	2.0	6.3	2.0	1.1
GCAATTTAAC	14768 Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410004M13, full insert sequence	0.0	10.0	2.0	5.3	1.0	0.0
ACGCGAAAAC	10702 calcyclin binding protein	0.0	10.0	2.0	4.2	3.1	3.2
ACTTCTGTAA	38607 RIKEN cDNA 1300004G08 gene	0.0	10.0	2.0	4.2	0.0	2.1
GTGAAAAAAA	2930 ESTs, Highly  similar to SSF1 PROTEIN [Saccharomyces cerevisiae]	0.0	10.0	2.0	3.2	2.0	3.2
GACAGATGGA	32191 gamma-aminobutyric acid (GABA) B receptor, 1	0.0	10.0	2.0	2.1	8.1	3.2
AAAGGACAGC	mito Tag matches mitochondrial sequence	0.0	10.0	2.0	2.1	1.0	1.1
GGGACCTAGG	143801 ataxin 2 binding protein 1 3304 neuron specific gene family member 2	0.0	10.0	2.0	0.0	3.1	0.0
AGAGCAAATG	41602 RIKEN cDNA 3110050O07 gene	0.0	10.0	2.0	0.0	0.0	1.1
TTGTGAGAAT	41192 ESTs	0.0	10.0	1.0	5.3	4.1	1.1
GAGAATGGCA	28864 RIKEN cDNA 4933424M23 gene	0.0	10.0	1.0	2.1	5.1	3.2
GAGGAGCCCC	2400 glutathione peroxidase 4	0.0	10.0	1.0	2.1	0.0	1.1
AAAGACTGAA	18298 RIKEN cDNA 2410002I22 gene 8688 RIKEN cDNA 0610011B04 gene	0.0	10.0	1.0	1.1	1.0	1.1
GTAGCCAATG	548 cytochrome c oxidase, subunit VIc	0.0	10.0	1.0	1.1	0.0	1.1
GCGGCAGCGC	29330 ESTs	0.0	10.0	1.0	1.1	0.0	0.0
TTTCAGCAAT	125770 ESTs 53761 RIKEN cDNA 2810449C10 gene	0.0	10.0	1.0	0.0	4.1	1.1
GGCCTTGACT	16763 aldolase 1, A isoform	0.0	10.0	1.0	0.0	2.0	0.0
CTATCCTCTC	7156 glutathione peroxidase 3	0.0	10.0	1.0	0.0	1.0	0.0
TAAATTGGAT	157648 RIKEN cDNA 5730403B10 gene 64201 RIKEN cDNA 5033428E16 gene	0.0	10.0	1.0	0.0	0.0	0.0
TATCTTTGGA	15571 amyloid beta (A4) precursor protein	0.0	10.0	0.0	3.2	1.0	0.0
CGGCAGACTG		0.0	10.0	0.0	3.2	0.0	0.0
TCTGACCTGC	829 S100 protein, beta polypeptide, neural	0.0	10.0	0.0	1.1	0.0	0.0
AAAAAAATAA	27730 ESTs, Highly  similar to PHOSPHATIDYLINOSITOL 4-KINASE ALPHA [Homo sapiens] 38231 ESTs, Weakly similar to DEPP [H.sapiens] 59780 ESTs	0.0	10.0	0.0	0.0	3.1	5.3
GGATTTATTC		0.0	10.0	0.0	0.0	0.0	0.0
GATCCCCTCT	38469 amyloid beta (A4) precursor protein-binding, family B, member 1	0.0	9.0	42.9	28.5	10.2	4.2
TATTAGTCTT	1843 heat shock protein, 86 kDa 1	0.0	9.0	33.7	13.7	14.3	25.3
GATAGAGAGT	1131 neural proliferation, differentiation and control gene 1	0.0	9.0	19.4	7.4	2.0	3.2
TATAGTATGT	2338 glutamine synthetase	0.0	9.0	19.4	1.1	13.2	8.4
AACTAGAAAA	21669 ESTs, Highly  similar to NADH-UBIQUINONE OXIDOREDUCTASE 49 KD SUBUNIT [Bos taurus]	0.0	9.0	18.4	7.4	10.2	23.2
GGGTGGGGTG	44292 RIKEN cDNA 4930415M08 gene	0.0	9.0	17.4	34.9	9.2	1.1
AGACTATGCA	17484 synuclein, alpha	0.0	9.0	17.4	3.2	5.1	0.0
CTCTGTTTTC	42805 Mus musculus, Similar to NADH dehydrogenase (ubiquinone) Fe-S protein 5 (15kD) (NADH-coenzyme Q reductase), clone MGC:7315, mRNA, complete cds	0.0	9.0	15.3	19.0	11.2	1.1
AGGCTTCTTA	34007 ESTs	0.0	9.0	12.3	13.7	5.1	9.5
TTGTAAAAGG	18921 valosin containing protein	0.0	9.0	12.3	6.3	4.1	5.3
GCTCTGGCTG	33343 ESTs, Highly similar to AF257319 1 SH3-containing protein SH3GLB2 [H.sapiens]	0.0	9.0	11.2	5.3	2.0	3.2
TATCAACACA	4804 tubby	0.0	9.0	11.2	2.1	4.1	7.4
CTTGTAGCTG	44854 ESTs	0.0	9.0	10.2	9.5	5.1	2.1
TTGATGTACA	27074 ESTs, Weakly similar to AF234765 1 serine-arginine-rich splicing regulatory protein SRRP86 [R.norvegicus]	0.0	9.0	10.2	8.5	9.2	8.4
TCACTTGTCA	24143 ESTs, Weakly similar to BcDNA.GH02974 [D.melanogaster] 46624 RIKEN cDNA 2610028H07 gene	0.0	9.0	10.2	7.4	8.1	8.4
TGGGAGAACA	4943 hairy and enhancer of split 5, (Drosophila)	0.0	9.0	10.2	4.2	1.0	0.0
CCGCCCCTTT	29846 N-myc downstream regulated 1, related sequence	0.0	9.0	9.2	8.5	17.3	2.1
TCAGTAATTT	4869 reticuloendotheliosis oncogene 89927 signal recognition particle 9 kDa	0.0	9.0	9.2	4.2	2.0	1.1
TATAGATTGA	9671 RIKEN cDNA 2610037L01 gene	0.0	9.0	8.2	5.3	1.0	5.3
CTCCGTTTTG	20365 glycoprotein Ib, beta polypeptide 29976 septin 5	0.0	9.0	7.2	6.3	3.1	0.0
CTGAGTTTGA	103439 G protein-coupled receptor, family C, group 5, member B 23964 natural killer tumor recognition sequence	0.0	9.0	5.1	15.9	9.2	5.3
CAGCAATAAA	29283 RIKEN cDNA 2610042J20 gene	0.0	9.0	5.1	7.4	6.1	3.2
ATATTGAAGA	12848 signal recognition particle 54 kDa	0.0	9.0	5.1	7.4	5.1	7.4
TCTGCACCTC	2645 eukaryotic translation elongation factor 1 alpha 2	0.0	9.0	4.1	8.5	10.2	1.1
GCCCAGGTTT	30149 stromal cell derived factor 4 6900 growth factor receptor bound protein 2	0.0	9.0	4.1	8.5	3.1	7.4
AACTTTTAAA	29822 heterochromatin protein 2, binding protein 3	0.0	9.0	4.1	6.3	2.0	5.3
CTGTGGAATA	23988 ESTs, Highly similar to Y281_HUMAN HYPOTHETICAL PROTEIN KIAA0281 [H.sapiens]	0.0	9.0	4.1	2.1	1.0	1.1
GCCACCCTCT	1008 prostaglandin D2 synthase (21 kDa, brain) 182692 SH3-domain GRB2-like B1 (endophilin)	0.0	9.0	4.1	2.1	0.0	1.1
AGCAGGTTTT	18041 calmodulin 2	0.0	9.0	3.1	9.5	2.0	0.0
TGGCCCTCTG	41692 ESTs, Highly similar to ribosome associated membrane protein RAMP4 [R.norvegicus]	0.0	9.0	3.1	5.3	1.0	1.1
TTCGGTACAT	139680 ESTs 18654 ESTs, Highly  similar to HYPOTHETICAL AMINOTRANSFERASE YJL060W [Saccharomyces cerevisiae]	0.0	9.0	3.1	5.3	0.0	0.0
CTAAAAAAAA	24479 ESTs 2999 fibroblast growth factor inducible 16 7729 aldolase 3, C isoform 806 CD 81 antigen	0.0	9.0	3.1	4.2	3.1	1.1
AAAGATTAAT	29586 RIKEN cDNA 2610024P12 gene 7356 sorting nexin 3	0.0	9.0	3.1	3.2	0.0	2.1
ATTTTTAAAA	160232 Mus musculus mitochondrial DNA, complete genome, strain:SAMP8 160222 Mus musculus mitochondrial DNA, complete genome, strain:SAMR1 160212 Mus musculus mitochondrial DNA, complete genome, strain:SAMP1 160202 Mus musculus domesticus mitochondrial DNA, complete genome 15571 amyloid beta (A4) precursor protein	0.0	9.0	3.1	2.1	5.1	5.3
AAAAAAATAG	29590 Mus musculus E2F-like transcriptional repressor protein mRNA, complete cds	0.0	9.0	3.1	1.1	1.0	4.2
AAAAGGTTGA	2626 amino-terminal enhancer of split	0.0	9.0	2.0	1.1	3.1	1.1
AATTAAATGT	1348 hypothetical protein, I54 138344 ESTs	0.0	9.0	2.0	1.1	0.0	0.0
GGGACTCCAA	46176 RIKEN cDNA 1500041B02 gene	0.0	9.0	1.0	3.2	0.0	3.2
CACACTGCCT	177179 RIKEN cDNA 0710001P07 gene 44241 RIKEN cDNA 1110004A22 gene	0.0	9.0	1.0	2.1	5.1	4.2
CTTGTTAGAC	mito Tag matches mitochondrial sequence	0.0	9.0	1.0	0.0	4.1	0.0
CCTTGACGGC		0.0	9.0	1.0	0.0	1.0	0.0
GAAGAGGTGG	2180 heat shock protein, 84 kDa 1 37763 ESTs	0.0	9.0	1.0	0.0	0.0	0.0
GCGCAGGGGA		0.0	9.0	0.0	2.1	0.0	0.0
TCACTAAAGC	2338 glutamine synthetase	0.0	9.0	0.0	1.1	6.1	1.1
CTTTTGTTAT		0.0	9.0	0.0	1.1	2.0	4.2
TATTCTCAAC	181476 ESTs 32321 vesicle-associated membrane protein 1	0.0	9.0	0.0	1.1	0.0	0.0
GGTGAGCCTG	42948 peroxiredoxin 2	0.0	9.0	0.0	0.0	9.2	19.0
CAGGGTGATG	42972 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	0.0	9.0	0.0	0.0	7.1	2.1
TGGCTATAAG		0.0	9.0	0.0	0.0	1.0	1.1
GCAGAATATC	1776 ferritin heavy chain	0.0	9.0	0.0	0.0	0.0	0.0
TCGATATCAA	2397 synaptophysin 5023 Purkinje cell protein 4	0.0	9.0	0.0	0.0	0.0	0.0
AAATGCTTGG	35439 secreted acidic cysteine rich glycoprotein	0.0	9.0	0.0	0.0	0.0	0.0
GGGAACGAAG	3766 protein phosphatase 1A, magnesium dependent, alpha isoform	0.0	9.0	0.0	0.0	0.0	0.0
AAGGCCAACC		0.0	9.0	0.0	0.0	0.0	0.0
AACGGGAGGT	2319 Scgn10 like-protein	0.0	8.0	29.6	7.4	9.2	0.0
GTAGGATAGC	10178 ESTs	0.0	8.0	20.4	3.2	5.1	8.4
CGGATTCGCA	41212 RIKEN cDNA 4833424K13 gene	0.0	8.0	19.4	8.5	2.0	5.3
GGTCTAATTT	3670 chaperonin subunit 2 (beta)	0.0	8.0	17.4	3.2	2.0	1.1

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